RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 GABRA5P31644 462 aa11.71□□□□□ -0.53
PPP1CA-201ENST00000312989 SSTR5P35346 364 aa11.71□□□□□ -0.53
PPP1CA-201ENST00000312989 KCNJ3P48549 501 aa11.71□□□□□ -0.53
PPP1CA-201ENST00000312989 HABP2Q14520 560 aaPredicted RBP11.71□□□□□ -0.53
PPP1CA-201ENST00000312989 LRRTM1Q86UE6 522 aa11.71□□□□□ -0.53
PPP1CA-201ENST00000312989 RTN4RL2Q86UN3 420 aa11.71□□□□□ -0.53
PPP1CA-201ENST00000312989 CDH26Q8IXH8 852 aa11.71□□□□□ -0.53
PPP1CA-201ENST00000312989 GAPTQ8N292 157 aa11.71□□□□□ -0.53
PPP1CA-201ENST00000312989 TMEM104Q8NE00 496 aa11.71□□□□□ -0.53
PPP1CA-201ENST00000312989 CFHR4Q92496 578 aa11.71□□□□□ -0.53
PPP1CA-201ENST00000312989 ERGIC3Q9Y282 383 aa11.71□□□□□ -0.53
PPP1CA-201ENST00000312989 PTGES3LE9PB15 166 aa11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 C15orf65H3BRN8 121 aa11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 BUB1B-PAK6H3BSN5 160 aa11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 OR7C1O76099 320 aaPredicted RBP11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 GLP1RP43220 463 aa11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 MPV17LQ2QL34 196 aa11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 SLC22A6Q4U2R8 563 aa11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 SIGIRRQ6IA17 410 aa11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 OR52W1Q6IF63 320 aa11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 FAM53AQ6NSI3 398 aaPredicted RBP11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 GLIPR1L1Q6UWM5 242 aa11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 LINC00596Q86U02 117 aa11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 MRGPRDQ8TDS7 321 aa11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 MND1Q9BWT6 205 aa11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 RAB18Q9NP72 206 aa11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 DPM3Q9P2X0 92 aa11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 MRPS28Q9Y2Q9 187 aaKnown RBP11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 DNAH3Q8TD57 4116 aa11.7□□□□□ -0.54
PPP1CA-201ENST00000312989 ERICH4A6NGS2 130 aa11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 ZNF780AO75290 641 aaPredicted RBP11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 TSPAN15O95858 294 aa11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 MAS1P04201 325 aa11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 GTF2F2P13984 249 aa11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 CRHBPP24387 322 aa11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 SPHARQ15513 63 aa11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 ACSM3Q53FZ2 586 aa11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 TPTE2P1Q5T6R2 138 aa11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 OR4C13Q8NGP0 309 aa11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 NDNFQ8TB73 568 aa11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 ZNF596Q8TC21 504 aa11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 LEAP2Q969E1 77 aa11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 NPFFR1Q9GZQ6 430 aa11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 WNT10AQ9GZT5 417 aa11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 IDI2-AS1Q9NZ38 188 aa11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 CKLFQ9UBR5 152 aa11.69□□□□□ -0.54
PPP1CA-201ENST00000312989 H0YHG0 523 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 AMY1AP04745 511 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 AMY2AP04746 511 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 CD24P25063 80 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 VHLP40337 213 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 BLCAPP62952 87 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 DIAPH2-AS1Q14236 149 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 ZNF497Q6ZNH5 498 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 TMEM91Q6ZNR0 172 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 JAGN1Q8N5M9 183 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 KLHDC1Q8N7A1 406 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 NKAIN3Q8N8D7 197 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 OR9G1Q8NH87 305 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 RFESDQ8TAC1 157 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 MYDGFQ969H8 173 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 Q96M66 194 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 GFI1Q99684 422 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 BARHL1Q9BZE3 327 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 MMP28Q9H239 520 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 PSG11Q9UQ72 335 aa11.68□□□□□ -0.54
PPP1CA-201ENST00000312989 A0A1W2PPI3 338 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 FAM90A18PA6NE21 464 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 FAM90A16PA6NEW6 464 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 FAM90A20PA6NIJ5 464 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 FAM90A9PA6NNJ1 464 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 FAM90A12PA8MX19 464 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 FAM90A5PA8MXJ8 464 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 J3QR06 171 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 IGHV3-7P01780 117 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 MT-ND4P03905 459 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 CSTBP04080 98 aaKnown RBP11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 UCHL1P09936 223 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 FAM90A15PP0C7V4 464 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 FAM90A13PP0C7W8 464 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 FAM90A14PP0C7W9 464 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 FAM90A24PP0C7X0 464 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 LOXL3P58215 753 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 GPR50Q13585 617 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 TPBGQ13641 420 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 IZUMO2Q6UXV1 221 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 MS4A15Q8N5U1 240 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 ZNF565Q8N9K5 539 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 OR10A7Q8NGE5 316 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 MRPS24Q96EL2 167 aaKnown RBP11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 UQCC2Q9BRT2 126 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 BANF2Q9H503 90 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 TCF7L1Q9HCS4 588 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 ABCB10Q9NRK6 738 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 TMEM30CPA0ZSE6 113 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 LEUTXA8MZ59 168 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 F2RL2O00254 374 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 WIPF1O43516 503 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 MGMTP16455 207 aa11.67□□□□□ -0.54
PPP1CA-201ENST00000312989 MAPK3P27361 379 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms