RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 MRPL24Q96A35 216 aaKnown RBP16.44■□□□□ 0.22
HOXC4-201ENST00000303406 SLC25A32Q9H2D1 315 aa16.44■□□□□ 0.22
HOXC4-201ENST00000303406 SEBOXQ9HB31 216 aaPredicted RBP16.44■□□□□ 0.22
HOXC4-201ENST00000303406 MBNL3Q9NUK0 354 aaKnown RBP16.44■□□□□ 0.22
HOXC4-201ENST00000303406 LUZP4Q9P127 313 aa16.44■□□□□ 0.22
HOXC4-201ENST00000303406 TMED3Q9Y3Q3 217 aa16.44■□□□□ 0.22
HOXC4-201ENST00000303406 PIGBOS1A0A0B4J2F0 54 aa16.43■□□□□ 0.22
HOXC4-201ENST00000303406 DUXBA0A1W2PPF3 345 aa16.43■□□□□ 0.22
HOXC4-201ENST00000303406 A8MXE2 369 aa16.43■□□□□ 0.22
HOXC4-201ENST00000303406 BET1O15155 118 aa16.43■□□□□ 0.22
HOXC4-201ENST00000303406 HAND1O96004 215 aa16.43■□□□□ 0.22
HOXC4-201ENST00000303406 NMBP08949 121 aa16.43■□□□□ 0.22
HOXC4-201ENST00000303406 GLRXP35754 106 aa16.43■□□□□ 0.22
HOXC4-201ENST00000303406 CD200P41217 278 aa16.43■□□□□ 0.22
HOXC4-201ENST00000303406 NHLH1Q02575 133 aa16.43■□□□□ 0.22
HOXC4-201ENST00000303406 MRGPRGQ86SM5 289 aa16.43■□□□□ 0.22
HOXC4-201ENST00000303406 H1FOOQ8IZA3 346 aaPredicted RBP16.43■□□□□ 0.22
HOXC4-201ENST00000303406 Q8NA96 180 aa16.43■□□□□ 0.22
HOXC4-201ENST00000303406 C3orf85A0A1B0GTC6 90 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 SIRPB1O00241 398 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 CRYAAP02489 173 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 FABP6P51161 128 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 NKX6-1P78426 367 aaPredicted RBP16.42■□□□□ 0.22
HOXC4-201ENST00000303406 ALKAL2Q6UX46 152 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 SSX8Q7RTT4 187 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 COMMD7Q86VX2 200 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 OR10Z1Q8NGY1 313 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 PLPPR1Q8TBJ4 325 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 KIRREL1Q96J84 757 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 TMEM56Q96MV1 263 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 CITED4Q96RK1 184 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 SLC5A7Q9GZV3 580 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 ZNF835Q9Y2P0 537 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 OR2W1Q9Y3N9 320 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 TMEM56-RWDD3S4R434 201 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 CEP250Q9BV73 2442 aa16.42■□□□□ 0.22
HOXC4-201ENST00000303406 A0A1B0GW55 424 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 IFNL4K9M1U5 179 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 SPDEFO95238 335 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 IGHV3-13P01766 116 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 RLN2P04090 185 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 DUX4L2P0CJ85 424 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 DUX4L3P0CJ86 424 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 DUX4L4P0CJ87 422 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 DUX4L5P0CJ88 424 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 DUX4L6P0CJ89 424 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 DUX4L7P0CJ90 424 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 ZNF83P51522 516 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 RPS23P62266 143 aaKnown RBP16.41■□□□□ 0.22
HOXC4-201ENST00000303406 SMCO1Q147U7 214 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 HMGN3Q15651 99 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 WDR82Q6UXN9 313 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 ACP7Q6ZNF0 438 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 DOLPP1Q86YN1 238 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 OR11L1Q8NGX0 322 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 OR10J5Q8NHC4 309 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 LILRB1Q8NHL6 650 aaPredicted RBP16.41■□□□□ 0.22
HOXC4-201ENST00000303406 ZNF471Q9BX82 626 aaPredicted RBP16.41■□□□□ 0.22
HOXC4-201ENST00000303406 TMEM222Q9H0R3 208 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 ELOVL5Q9NYP7 299 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 OR5AC2Q9NZP5 309 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 TAAR3PQ9P1P4 343 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 DUX4Q9UBX2 424 aa16.41■□□□□ 0.22
HOXC4-201ENST00000303406 M0R1B8 84 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 PHF1O43189 567 aaPredicted RBP16.4■□□□□ 0.22
HOXC4-201ENST00000303406 S100GP29377 79 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 LUMP51884 338 aaPredicted RBP16.4■□□□□ 0.22
HOXC4-201ENST00000303406 FAM90A1Q86YD7 464 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 CMTM1Q8IZ96 169 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 OR1S1Q8NH92 325 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 SECTM1Q8WVN6 248 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 IL22RA2Q969J5 263 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 RRNAD1Q96FB5 475 aaKnown RBP16.4■□□□□ 0.22
HOXC4-201ENST00000303406 SHARPINQ9H0F6 387 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 GSKIPQ9P0R6 139 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 TMEM30CPA0ZSE6 113 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 F5H0A9 414 aaPredicted RBP16.4■□□□□ 0.22
HOXC4-201ENST00000303406 TAAR5O14804 337 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 GFRA3O60609 400 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 DEDDO75618 318 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 RCC1P18754 421 aaPredicted RBP16.4■□□□□ 0.22
HOXC4-201ENST00000303406 CFHR2P36980 270 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 UCNP55089 124 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 PAX5Q02548 391 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 SMIM21Q3B7S5 101 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 SP6Q3SY56 376 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 SLC35E4Q6ICL7 350 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 ZNF818PQ6ZRF7 136 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 TBC1D26Q86UD7 250 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 PDZD9Q8IXQ8 264 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 TP53RKQ96S44 253 aa16.4■□□□□ 0.22
HOXC4-201ENST00000303406 DMXL1Q9Y485 3027 aa16.39■□□□□ 0.21
HOXC4-201ENST00000303406 IGLV3-9A0A075B6K5 115 aa16.39■□□□□ 0.21
HOXC4-201ENST00000303406 IGKV1D-13A0A0B4J2D9 117 aa16.39■□□□□ 0.21
HOXC4-201ENST00000303406 A6NLC8 198 aa16.39■□□□□ 0.21
HOXC4-201ENST00000303406 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.39■□□□□ 0.21
HOXC4-201ENST00000303406 CDS2O95674 445 aa16.39■□□□□ 0.21
HOXC4-201ENST00000303406 IGKV1-13P0DP09 117 aa16.39■□□□□ 0.21
HOXC4-201ENST00000303406 TPT1P13693 172 aaKnown RBP16.39■□□□□ 0.21
HOXC4-201ENST00000303406 UCP1P25874 307 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms