RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 FBXW9Q5XUX1 488 aa18.15■□□□□ 0.5
LTBP3-201ENST00000301873 MISP3Q96FF7 219 aa18.15■□□□□ 0.5
LTBP3-201ENST00000301873 TOLLIPQ9H0E2 274 aa18.15■□□□□ 0.5
LTBP3-201ENST00000301873 IGLV1-36A0A0B4J1U3 117 aa18.15■□□□□ 0.5
LTBP3-201ENST00000301873 DNPH1O43598 174 aa18.15■□□□□ 0.5
LTBP3-201ENST00000301873 ROM1Q03395 351 aa18.15■□□□□ 0.5
LTBP3-201ENST00000301873 SBF2Q86WG5 1849 aa18.15■□□□□ 0.5
LTBP3-201ENST00000301873 OR2T6Q8NHC8 308 aa18.14■□□□□ 0.5
LTBP3-201ENST00000301873 RAB33BQ9H082 229 aa18.14■□□□□ 0.5
LTBP3-201ENST00000301873 COLQQ9Y215 455 aaPredicted RBP18.14■□□□□ 0.5
LTBP3-201ENST00000301873 OR5H1A6NKK0 313 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 SLC31A2O15432 143 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 PMELP40967 661 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 KRTDAPP60985 99 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 PAX5Q02548 391 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 MPV17LQ2QL34 196 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 TMEM211Q6ICI0 200 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 HOGA1Q86XE5 327 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 ADIPOR1Q96A54 375 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 ALX4Q9H161 411 aaPredicted RBP18.14■□□□□ 0.49
LTBP3-201ENST00000301873 LPAR5Q9H1C0 372 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 LPAR3Q9UBY5 353 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 RBFOX3A6NFN3 312 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 PPIHO43447 177 aaKnown RBP18.14■□□□□ 0.49
LTBP3-201ENST00000301873 HAND1O96004 215 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 MOGAT3Q86VF5 341 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 TPRX1Q8N7U7 411 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 HS3ST3B1Q9Y662 390 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 MS4A3Q96HJ5 214 aa18.14■□□□□ 0.49
LTBP3-201ENST00000301873 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.13■□□□□ 0.491e-12■■■■□ 26.5
LTBP3-201ENST00000301873 FAM157AC9JC47 383 aa18.13■□□□□ 0.49
LTBP3-201ENST00000301873 KCNK17Q96T54 332 aa18.13■□□□□ 0.49
LTBP3-201ENST00000301873 TMEM74BQ9NUR3 256 aa18.13■□□□□ 0.49
LTBP3-201ENST00000301873 ONECUT1Q9UBC0 465 aa18.13■□□□□ 0.49
LTBP3-201ENST00000301873 IGKV1D-42A0A075B6H8 117 aa18.13■□□□□ 0.49
LTBP3-201ENST00000301873 TRBV5-5A0A0J9YX44 114 aa18.13■□□□□ 0.49
LTBP3-201ENST00000301873 B3GALNT1O75752 331 aa18.13■□□□□ 0.49
LTBP3-201ENST00000301873 SP1P08047 785 aa18.13■□□□□ 0.49
LTBP3-201ENST00000301873 TUSC1Q2TAM9 212 aa18.13■□□□□ 0.49
LTBP3-201ENST00000301873 FHL5Q5TD97 284 aa18.13■□□□□ 0.49
LTBP3-201ENST00000301873 RAB7AP51149 207 aa18.13■□□□□ 0.49
LTBP3-201ENST00000301873 OR5I1Q13606 314 aa18.13■□□□□ 0.49
LTBP3-201ENST00000301873 CA5BP1Q8WTZ4 195 aa18.13■□□□□ 0.49
LTBP3-201ENST00000301873 TIMM9Q9Y5J7 89 aa18.13■□□□□ 0.49
LTBP3-201ENST00000301873 NRXN2Q9P2S2 1712 aa18.13■□□□□ 0.49
LTBP3-201ENST00000301873 MS4A18H0YCH9 400 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 SPP1P10451 314 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 MS4A18Q3C1V0 323 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 MDP1Q86V88 176 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 OR5D13Q8NGL4 314 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 FAM210BQ96KR6 192 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 RCC2Q9P258 522 aaKnown RBP18.12■□□□□ 0.49
LTBP3-201ENST00000301873 TAF1LQ8IZX4 1826 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 SHISA3A0PJX4 238 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 AWAT1Q58HT5 328 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 LINC01590Q5TEZ4 76 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 NDFIP1Q9BT67 221 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 ELF5Q9UKW6 265 aaPredicted RBP18.12■□□□□ 0.49
LTBP3-201ENST00000301873 SHANK1Q9Y566 2161 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 DOCK6Q96HP0 2047 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 A0A1W2PNV4 684 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 A0A1W2PQM1 296 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 FBP1P09467 338 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 CXCL2P19875 107 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 P2RY1P47900 373 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 TGIF1Q15583 401 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 R3HDM4Q96D70 268 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 CDS2O95674 445 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 CD1AP06126 327 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 C1QTNF12Q5T7M4 302 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 TRAF4Q9BUZ4 470 aaPredicted RBP18.12■□□□□ 0.49
LTBP3-201ENST00000301873 TMEM147Q9BVK8 224 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 OR2W1Q9Y3N9 320 aa18.12■□□□□ 0.49
LTBP3-201ENST00000301873 ABCA4P78363 2273 aa18.11■□□□□ 0.49
LTBP3-201ENST00000301873 AESQ08117 197 aa18.11■□□□□ 0.49
LTBP3-201ENST00000301873 APOBEC4Q8WW27 367 aaKnown RBP18.11■□□□□ 0.49
LTBP3-201ENST00000301873 PTX4Q96A99 478 aa18.11■□□□□ 0.49
LTBP3-201ENST00000301873 GZMHP20718 246 aa18.11■□□□□ 0.49
LTBP3-201ENST00000301873 HLA-DRB3P79483 266 aa18.11■□□□□ 0.49
LTBP3-201ENST00000301873 FNDC7Q5VTL7 733 aa18.11■□□□□ 0.49
LTBP3-201ENST00000301873 TMEM251Q8N6I4 163 aa18.11■□□□□ 0.49
LTBP3-201ENST00000301873 SSMEM1Q8WWF3 244 aa18.11■□□□□ 0.49
LTBP3-201ENST00000301873 THY1P04216 161 aa18.11■□□□□ 0.49
LTBP3-201ENST00000301873 FCER1GP30273 86 aa18.11■□□□□ 0.49
LTBP3-201ENST00000301873 EWSR1Q01844 656 aaKnown RBP eCLIP18.11■□□□□ 0.49
LTBP3-201ENST00000301873 GAMTQ14353 236 aa18.11■□□□□ 0.49
LTBP3-201ENST00000301873 SSX7Q7RTT5 188 aa18.11■□□□□ 0.49
LTBP3-201ENST00000301873 OR1K1Q8NGR3 316 aa18.11■□□□□ 0.49
LTBP3-201ENST00000301873 DTD1Q8TEA8 209 aa18.11■□□□□ 0.49
LTBP3-201ENST00000301873 TTTY12Q9BZ98 90 aa18.11■□□□□ 0.49
LTBP3-201ENST00000301873 NAT8BQ9UHF3 227 aa18.11■□□□□ 0.49
LTBP3-201ENST00000301873 FGF2P09038 288 aa18.1■□□□□ 0.49
LTBP3-201ENST00000301873 RSRP1Q9BUV0 290 aa18.1■□□□□ 0.49
LTBP3-201ENST00000301873 GLRX2Q9NS18 164 aa18.1■□□□□ 0.49
LTBP3-201ENST00000301873 TRAPPC1Q9Y5R8 145 aa18.1■□□□□ 0.49
LTBP3-201ENST00000301873 DOCK8Q8NF50 2099 aa18.1■□□□□ 0.49
LTBP3-201ENST00000301873 RPS4Y1P22090 263 aaKnown RBP18.1■□□□□ 0.49
LTBP3-201ENST00000301873 TRAT1Q6PIZ9 186 aa18.1■□□□□ 0.49
LTBP3-201ENST00000301873 OR4S2Q8NH73 311 aa18.1■□□□□ 0.49
LTBP3-201ENST00000301873 GAL3ST2Q9H3Q3 398 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms