RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 H0YL77 283 aa20.88■□□□□ 0.93
SPTSSA-201ENST00000298130 CTAG1AP78358 180 aa20.88■□□□□ 0.93
SPTSSA-201ENST00000298130 NCMAPQ5T1S8 102 aa20.88■□□□□ 0.93
SPTSSA-201ENST00000298130 TCEAL6Q6IPX3 200 aa20.88■□□□□ 0.93
SPTSSA-201ENST00000298130 TCEAL3Q969E4 200 aa20.88■□□□□ 0.93
SPTSSA-201ENST00000298130 STRAPQ9Y3F4 350 aaKnown RBP20.88■□□□□ 0.93
SPTSSA-201ENST00000298130 PRSS44E7EML9 344 aa20.88■□□□□ 0.93
SPTSSA-201ENST00000298130 DNPH1O43598 174 aa20.88■□□□□ 0.93
SPTSSA-201ENST00000298130 CYTIPO60759 359 aa20.88■□□□□ 0.93
SPTSSA-201ENST00000298130 AGAP20933 346 aa20.88■□□□□ 0.93
SPTSSA-201ENST00000298130 ZNF343Q6P1L6 599 aa20.88■□□□□ 0.93
SPTSSA-201ENST00000298130 SPSB3Q6PJ21 355 aa20.88■□□□□ 0.93
SPTSSA-201ENST00000298130 CT55Q8WUE5 264 aa20.88■□□□□ 0.93
SPTSSA-201ENST00000298130 SIGLEC12Q96PQ1 595 aa20.88■□□□□ 0.93
SPTSSA-201ENST00000298130 PBDC1Q9BVG4 233 aa20.88■□□□□ 0.93
SPTSSA-201ENST00000298130 PLA2G3Q9NZ20 509 aa20.88■□□□□ 0.93
SPTSSA-201ENST00000298130 NBEAQ8NFP9 2946 aa20.87■□□□□ 0.93
SPTSSA-201ENST00000298130 CYC1P08574 325 aa20.87■□□□□ 0.93
SPTSSA-201ENST00000298130 GFRA1P56159 465 aa20.87■□□□□ 0.93
SPTSSA-201ENST00000298130 RND3P61587 244 aa20.87■□□□□ 0.93
SPTSSA-201ENST00000298130 ZNF561Q8N587 486 aa20.87■□□□□ 0.93
SPTSSA-201ENST00000298130 THOC3Q96J01 351 aaKnown RBP20.87■□□□□ 0.93
SPTSSA-201ENST00000298130 RPS23P62266 143 aaKnown RBP20.87■□□□□ 0.93
SPTSSA-201ENST00000298130 FOXO1Q12778 655 aa20.87■□□□□ 0.93
SPTSSA-201ENST00000298130 HNF4GQ14541 408 aa20.87■□□□□ 0.93
SPTSSA-201ENST00000298130 SPATA46Q5T0L3 261 aa20.87■□□□□ 0.93
SPTSSA-201ENST00000298130 RIPPLY2Q5TAB7 128 aa20.87■□□□□ 0.93
SPTSSA-201ENST00000298130 FAM180AQ6UWF9 173 aa20.87■□□□□ 0.93
SPTSSA-201ENST00000298130 PCSK5Q92824 1860 aa20.87■□□□□ 0.93
SPTSSA-201ENST00000298130 CDS2O95674 445 aa20.86■□□□□ 0.93
SPTSSA-201ENST00000298130 LMO1P25800 156 aa20.86■□□□□ 0.93
SPTSSA-201ENST00000298130 ZXDAP98168 799 aa20.86■□□□□ 0.93
SPTSSA-201ENST00000298130 REPIN1Q9BWE0 567 aaKnown RBP20.86■□□□□ 0.93
SPTSSA-201ENST00000298130 PLEKHF2Q9H8W4 249 aa20.86■□□□□ 0.93
SPTSSA-201ENST00000298130 NIT2Q9NQR4 276 aa20.86■□□□□ 0.93
SPTSSA-201ENST00000298130 KIAA2026Q5HYC2 2103 aa20.86■□□□□ 0.93
SPTSSA-201ENST00000298130 RBFOX3A6NFN3 312 aa20.86■□□□□ 0.93
SPTSSA-201ENST00000298130 B2MP61769 119 aa20.86■□□□□ 0.93
SPTSSA-201ENST00000298130 TMEM267Q0VDI3 215 aaPredicted RBP20.86■□□□□ 0.93
SPTSSA-201ENST00000298130 COMMD1Q8N668 190 aa20.86■□□□□ 0.93
SPTSSA-201ENST00000298130 PSMF1Q92530 271 aa20.86■□□□□ 0.93
SPTSSA-201ENST00000298130 CPNE4Q96A23 557 aaPredicted RBP20.86■□□□□ 0.93
SPTSSA-201ENST00000298130 SPSB4Q96A44 273 aa20.86■□□□□ 0.93
SPTSSA-201ENST00000298130 LYRM2Q9NU23 88 aaPredicted RBP20.86■□□□□ 0.93
SPTSSA-201ENST00000298130 LINC00587B1AMM8 73 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 WRBO00258 174 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 OR1J1Q8NGS3 322 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 TMEM56Q96MV1 263 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 FAM86C1Q9NVL1 165 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 TMEM56-RWDD3S4R434 201 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 OR2C1O95371 312 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 NAPSAO96009 420 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 RAB5CP51148 216 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 ZNF266Q14584 549 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 ZDHHC23Q8IYP9 409 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 PLPPR1Q8TBJ4 325 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 PRDM14Q9GZV8 571 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 ZNF391Q9UJN7 358 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 TRAPPC2LH3BP13 241 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 FGF12P61328 243 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 ATPIF1Q9UII2 106 aa20.85■□□□□ 0.93
SPTSSA-201ENST00000298130 WDR5BQ86VZ2 330 aa20.84■□□□□ 0.93
SPTSSA-201ENST00000298130 IL22RA1Q8N6P7 574 aa20.84■□□□□ 0.93
SPTSSA-201ENST00000298130 PITX3O75364 302 aa20.84■□□□□ 0.93
SPTSSA-201ENST00000298130 RHBDL1O75783 438 aa20.84■□□□□ 0.93
SPTSSA-201ENST00000298130 OR8U8P0C7N1 319 aa20.84■□□□□ 0.93
SPTSSA-201ENST00000298130 MAGEA5P43359 124 aa20.84■□□□□ 0.93
SPTSSA-201ENST00000298130 RPS10P46783 165 aaKnown RBP20.84■□□□□ 0.93
SPTSSA-201ENST00000298130 RAB1AP62820 205 aa20.84■□□□□ 0.93
SPTSSA-201ENST00000298130 NMSQ5H8A3 153 aa20.84■□□□□ 0.93
SPTSSA-201ENST00000298130 LINC00696Q6ZRV3 163 aa20.84■□□□□ 0.93
SPTSSA-201ENST00000298130 COLCA1Q6ZS62 124 aa20.84■□□□□ 0.93
SPTSSA-201ENST00000298130 CYB561D1Q8N8Q1 229 aa20.84■□□□□ 0.93
SPTSSA-201ENST00000298130 PLSCR2Q9NRY7 297 aa20.84■□□□□ 0.93
SPTSSA-201ENST00000298130 H3BQ15 152 aa20.83■□□□□ 0.93
SPTSSA-201ENST00000298130 UBE2CO00762 179 aa20.83■□□□□ 0.93
SPTSSA-201ENST00000298130 BCL2L14Q9BZR8 327 aa20.83■□□□□ 0.93
SPTSSA-201ENST00000298130 TAAR3PQ9P1P4 343 aa20.83■□□□□ 0.93
SPTSSA-201ENST00000298130 PGLYRP1O75594 196 aaPredicted RBP20.83■□□□□ 0.92
SPTSSA-201ENST00000298130 PSG2P11465 335 aa20.83■□□□□ 0.92
SPTSSA-201ENST00000298130 TLE1Q04724 770 aa20.83■□□□□ 0.92
SPTSSA-201ENST00000298130 ESPL1Q14674 2120 aa20.83■□□□□ 0.92
SPTSSA-201ENST00000298130 DCAF12Q5T6F0 453 aa20.83■□□□□ 0.92
SPTSSA-201ENST00000298130 RAB39BQ96DA2 213 aa20.83■□□□□ 0.92
SPTSSA-201ENST00000298130 OR1A1Q9P1Q5 309 aa20.83■□□□□ 0.92
SPTSSA-201ENST00000298130 ERRFI1Q9UJM3 462 aaPredicted RBP20.83■□□□□ 0.92
SPTSSA-201ENST00000298130 MED13Q9UHV7 2174 aa20.83■□□□□ 0.92
SPTSSA-201ENST00000298130 ZFHX4Q86UP3 3567 aa20.82■□□□□ 0.92
SPTSSA-201ENST00000298130 RD3LP0DJH9 198 aa20.82■□□□□ 0.92
SPTSSA-201ENST00000298130 PAX6P26367 422 aa20.82■□□□□ 0.92
SPTSSA-201ENST00000298130 RNF212Q495C1 297 aa20.82■□□□□ 0.92
SPTSSA-201ENST00000298130 C12orf49Q9H741 205 aa20.82■□□□□ 0.92
SPTSSA-201ENST00000298130 LOXL2Q9Y4K0 774 aa20.82■□□□□ 0.92
SPTSSA-201ENST00000298130 PAX9P55771 341 aa20.82■□□□□ 0.92
SPTSSA-201ENST00000298130 CEACAM21Q3KPI0 293 aa20.82■□□□□ 0.92
SPTSSA-201ENST00000298130 Q6ZRM9 215 aa20.82■□□□□ 0.92
SPTSSA-201ENST00000298130 MKXQ8IYA7 352 aa20.82■□□□□ 0.92
SPTSSA-201ENST00000298130 S100A9P06702 114 aaKnown RBP20.81■□□□□ 0.92
SPTSSA-201ENST00000298130 IAPPP10997 89 aa20.81■□□□□ 0.92
SPTSSA-201ENST00000298130 ZNF16P17020 682 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms