RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 CXorf1O96002 111 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 FGF2P09038 288 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 GALP22466 123 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 INSM1Q01101 510 aaPredicted RBP10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 P2RY6Q15077 328 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 DEGS2Q6QHC5 323 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 HLA-DRB1P01911 266 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 CBLN1P23435 193 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 C7orf71A4D174 169 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 SMIM21Q3B7S5 101 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 CCL27Q9Y4X3 112 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 KLF4O43474 513 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 EWSR1Q01844 656 aaKnown RBP eCLIP10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 TWIST1Q15672 202 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 ZFP64Q9NPA5 681 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 B9D1Q9UPM9 204 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 A0A1W2PNR3 127 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 ZNF324O75467 553 aaPredicted RBP10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 ATP6V0CP27449 155 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 NTSR1P30989 418 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 RRADP55042 308 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 FZD5Q13467 585 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 C12orf76Q8N812 135 aaPredicted RBP10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 IGHEP01854 428 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 DEFB108BQ8NET1 73 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 SLC17A3O00476 420 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 ZNF205O95201 554 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 OR10AG1Q8NH19 301 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 JKAMPQ9P055 326 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 RUNX1Q01196 453 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 OR4S2Q8NH73 311 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 PGLYRP4Q96LB8 373 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 TIMM10BQ9Y5J6 103 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 CTXND1A0A1B0GTU2 59 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 A0A1B0GW15 77 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 OTOSQ8NHW6 89 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 SOSTQ9BQB4 213 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 NPPBP16860 134 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 P2RY4P51582 365 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 PTPMT1Q8WUK0 201 aaPredicted RBP10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 NDUFAF3Q9BU61 184 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 TMEM167BQ9NRX6 74 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 OR5AC2Q9NZP5 309 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 UTP23Q9BRU9 249 aaKnown RBP10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 SCN7AQ01118 1682 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 NPIPB9F8W1W9 429 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 GLIPR1P48060 266 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 SMOC1Q9H4F8 434 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 FHITP49789 147 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 C21orf58P58505 322 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 DUSP8Q13202 625 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 ZNF770Q6IQ21 691 aaPredicted RBP10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 PRNTQ86SH4 94 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 LOC390937A0A1W2PQ73 354 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 NPIPB8E9PQR5 432 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 NPIPB7O75200 414 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 DUSP3P51452 185 aaPredicted RBP10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 LYZL2Q7Z4W2 148 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 C19orf53Q9UNZ5 99 aaPredicted RBP10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 IGHV3-20A0A0C4DH32 117 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 RPL30P62888 115 aaKnown RBP10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 OR11H4Q8NGC9 324 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 FAM216AQ8WUB2 273 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 PKIBQ9C010 78 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 TMEM38BQ9NVV0 291 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 NAV3Q8IVL0 2385 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 LSM10Q969L4 123 aaKnown RBP10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 TMEM30CPA0ZSE6 113 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 HIST1H1BP16401 226 aaKnown RBP10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 APOBEC1P41238 236 aaKnown RBP10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 ANKRD55Q3KP44 614 aa10.42□□□□□ -0.74
SHROOM3-201ENST00000296043 NDUFB4O95168 129 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 HPRT1P00492 218 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 EDN1P05305 212 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 PMCHL2Q9BQD1 86 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 MIEN1Q9BRT3 115 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 KISS1Q15726 138 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 CXorf67Q86X51 503 aaPredicted RBP10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 NPEPL1Q8NDH3 523 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 GABRG3Q99928 467 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 POLDIP2Q9Y2S7 368 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 ETHE1O95571 254 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 CTSDP07339 412 aaPredicted RBP10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 FUT5Q11128 374 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 BIVMQ86UB2 503 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 OR2I1PQ8NGU4 316 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 USP3Q9Y6I4 520 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 MAST2Q6P0Q8 1798 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 ZNF735P0CB33 412 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 FCARP24071 287 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 PRSS8Q16651 343 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 SH3BGRL3Q9H299 93 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 KCND3Q9UK17 655 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 IGHV3-13P01766 116 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 IGHV3-7P01780 117 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 SRSF4Q08170 494 aaKnown RBP10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 DGAT2L7PQ6IED9 249 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 NEU1Q99519 415 aa10.41□□□□□ -0.74
SHROOM3-201ENST00000296043 SELENOKQ9Y6D0 94 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms