RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 BAHD1Q8TBE0 780 aaPredicted RBP8.85□□□□□ -0.99
CLDN1-201ENST00000295522 RHBDD1Q8TEB9 315 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 TMEM170AQ8WVE7 144 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 IMMP2LQ96T52 175 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 MIEN1Q9BRT3 115 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 CTDSP1Q9GZU7 261 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 MANBALQ9NQG1 85 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 KNTC1P50748 2209 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 KIAA1549LQ6ZVL6 1849 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 LILRB3O75022 631 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 MT-ATP6P00846 226 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 HRASP01112 189 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 CTSEP14091 401 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 SLC6A8P48029 635 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 DAP3P51398 398 aaKnown RBP8.85□□□□□ -0.99
CLDN1-201ENST00000295522 HNRNPA3P51991 378 aaKnown RBP8.85□□□□□ -0.99
CLDN1-201ENST00000295522 VAMP3Q15836 100 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 WDFY1Q8IWB7 410 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 ATOH7Q8N100 152 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 C1orf147Q96MC9 270 aaPredicted RBP8.85□□□□□ -0.99
CLDN1-201ENST00000295522 RNF150Q9ULK6 438 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 SPINK4O60575 86 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 SRSF10O75494 262 aaKnown RBP8.84□□□□□ -0.99
CLDN1-201ENST00000295522 TAS2R30P59541 319 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 UBE2G2P60604 165 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 GAGE1Q13065 139 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 MFAP5Q13361 173 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 LILRA6Q6PI73 481 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 NUFIP2Q7Z417 695 aaKnown RBP8.84□□□□□ -0.99
CLDN1-201ENST00000295522 LYPD6Q86Y78 171 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 OR51G1Q8NGK1 321 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 SLC35E1Q96K37 410 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 HDAC8Q9BY41 377 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 ZNF552Q9H707 407 aaPredicted RBP8.84□□□□□ -0.99
CLDN1-201ENST00000295522 B3GAT1Q9P2W7 334 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 RBM7Q9Y580 266 aaKnown RBP8.84□□□□□ -0.99
CLDN1-201ENST00000295522 H3BMH7 237 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 CDKN1AP38936 164 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 IL24Q13007 206 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 SYT13Q7L8C5 426 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 GRINAQ7Z429 371 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 OR1K1Q8NGR3 316 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 OR1N1Q8NGS0 311 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 LYRM2Q9NU23 88 aaPredicted RBP8.84□□□□□ -0.99
CLDN1-201ENST00000295522 CHD7Q9P2D1 2997 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 SLC17A4Q9Y2C5 497 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 ZFP30Q9Y2G7 519 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 MTCH2Q9Y6C9 303 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 PCNX3Q9H6A9 2034 aa8.84□□□□□ -0.99
CLDN1-201ENST00000295522 TDRD6O60522 2096 aaKnown RBP8.84□□□□□ -1
CLDN1-201ENST00000295522 A0A0J9YY10 115 aa8.84□□□□□ -1
CLDN1-201ENST00000295522 CRYAAP02489 173 aa8.84□□□□□ -1
CLDN1-201ENST00000295522 GALNSP34059 522 aa8.84□□□□□ -1
CLDN1-201ENST00000295522 PSMB3P49720 205 aa8.84□□□□□ -1
CLDN1-201ENST00000295522 RPL23P62829 140 aaKnown RBP8.84□□□□□ -1
CLDN1-201ENST00000295522 PIGYQ3MUY2 71 aa8.84□□□□□ -1
CLDN1-201ENST00000295522 TBC1D26Q86UD7 250 aa8.84□□□□□ -1
CLDN1-201ENST00000295522 MRPL30Q8TCC3 161 aaKnown RBP8.84□□□□□ -1
CLDN1-201ENST00000295522 GATAD1Q8WUU5 269 aa8.84□□□□□ -1
CLDN1-201ENST00000295522 LIPHQ8WWY8 451 aa8.84□□□□□ -1
CLDN1-201ENST00000295522 WNT16Q9UBV4 365 aa8.84□□□□□ -1
CLDN1-201ENST00000295522 UBE2L5PA0A1B0GUS4 154 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 PMCHP20382 165 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 SUMO1P63165 101 aaKnown RBP8.83□□□□□ -1
CLDN1-201ENST00000295522 SHHQ15465 462 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 SPANXN5Q5MJ07 72 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 UNQ5815/PRO19632Q6UWF5 114 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 H1FOOQ8IZA3 346 aaPredicted RBP8.83□□□□□ -1
CLDN1-201ENST00000295522 MRPL43Q8N983 215 aaKnown RBP8.83□□□□□ -1
CLDN1-201ENST00000295522 MSI2Q96DH6 328 aaKnown RBP8.83□□□□□ -1
CLDN1-201ENST00000295522 ALKBH7Q9BT30 221 aaPredicted RBP8.83□□□□□ -1
CLDN1-201ENST00000295522 PARLQ9H300 379 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 CISD1Q9NZ45 108 aaKnown RBP8.83□□□□□ -1
CLDN1-201ENST00000295522 B4DGG1 531 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 M0QZ24 198 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 TMEM50AO95807 157 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 GYPAP02724 150 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 PFN1P07737 140 aaKnown RBP8.83□□□□□ -1
CLDN1-201ENST00000295522 UMODP07911 640 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 DEFA4P12838 97 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 TPPP2P59282 170 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 GTF3C1Q12789 2109 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.83□□□□□ -1
CLDN1-201ENST00000295522 DOK3Q7L591 496 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 OR2AE1Q8NHA4 323 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 APH1AQ96BI3 265 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 ANGPTL4Q9BY76 406 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 OR6C3Q9NZP0 311 aa8.83□□□□□ -1
CLDN1-201ENST00000295522 TRBV11-1A0A0K0K1C0 115 aa8.82□□□□□ -1
CLDN1-201ENST00000295522 PGPEP1LA6NFU8 196 aa8.82□□□□□ -1
CLDN1-201ENST00000295522 TMEM150CB9EJG8 249 aa8.82□□□□□ -1
CLDN1-201ENST00000295522 MPPED1O15442 326 aa8.82□□□□□ -1
CLDN1-201ENST00000295522 CCL25O15444 150 aa8.82□□□□□ -1
CLDN1-201ENST00000295522 CXCL10P02778 98 aa8.82□□□□□ -1
CLDN1-201ENST00000295522 TMEM11P17152 192 aa8.82□□□□□ -1
CLDN1-201ENST00000295522 SPINK2P20155 84 aa8.82□□□□□ -1
CLDN1-201ENST00000295522 FOXL2P58012 376 aa8.82□□□□□ -1
CLDN1-201ENST00000295522 PPP1CBP62140 327 aa8.82□□□□□ -1
CLDN1-201ENST00000295522 MEF2BQ02080 365 aaPredicted RBP8.82□□□□□ -1
CLDN1-201ENST00000295522 ABLIM2Q6H8Q1 611 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms