RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 GNRHR2Q96P88 292 aa11.72□□□□□ -0.53
SMARCA5-201ENST00000283131 LRRC3BQ96PB8 259 aa11.72□□□□□ -0.53
SMARCA5-201ENST00000283131 MTCH2Q9Y6C9 303 aa11.72□□□□□ -0.53
SMARCA5-201ENST00000283131 PF4P02776 101 aa11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 C2orf88Q9BSF0 95 aa11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 PARP11Q9NR21 331 aa11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 NSUN5P2Q63ZY6 315 aa11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 SLC25A19Q9HC21 320 aa11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 FGF22Q9HCT0 170 aa11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 CLN8Q9UBY8 286 aa11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 TRDCB7Z8K6 153 aa11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 EPPINO95925 133 aa11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 SKP2Q13309 424 aa11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 MMDQ15546 238 aa11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 Q6ZSR9 355 aa11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 OTOSQ8NHW6 89 aa11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 ZNF707Q96C28 371 aaPredicted RBP11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 DMRTA2Q96SC8 542 aa11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 WNT5BQ9H1J7 359 aa11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 CACNA1DQ01668 2161 aa11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 INTS1Q8N201 2190 aaKnown RBP11.71□□□□□ -0.53
SMARCA5-201ENST00000283131 H0Y8X5 98 aa11.71□□□□□ -0.54
SMARCA5-201ENST00000283131 FUCA1P04066 466 aa11.71□□□□□ -0.54
SMARCA5-201ENST00000283131 CHD2O14647 1828 aaKnown RBP11.71□□□□□ -0.54
SMARCA5-201ENST00000283131 HOXA3O43365 443 aaPredicted RBP11.71□□□□□ -0.54
SMARCA5-201ENST00000283131 TEPPQ6URK8 271 aa11.71□□□□□ -0.54
SMARCA5-201ENST00000283131 TOX2Q96NM4 488 aa11.71□□□□□ -0.54
SMARCA5-201ENST00000283131 TMEM204Q9BSN7 226 aa11.71□□□□□ -0.54
SMARCA5-201ENST00000283131 CCL27Q9Y4X3 112 aa11.71□□□□□ -0.54
SMARCA5-201ENST00000283131 SPATA31D1Q6ZQQ2 1576 aa11.71□□□□□ -0.54
SMARCA5-201ENST00000283131 TMEM202A6NGA9 273 aa11.71□□□□□ -0.54
SMARCA5-201ENST00000283131 WNT1P04628 370 aa11.71□□□□□ -0.54
SMARCA5-201ENST00000283131 ARF6P62330 175 aa11.71□□□□□ -0.54
SMARCA5-201ENST00000283131 CLDN10P78369 228 aa11.71□□□□□ -0.54
SMARCA5-201ENST00000283131 PATE1Q8WXA2 126 aa11.71□□□□□ -0.54
SMARCA5-201ENST00000283131 A0A1B0GV72 72 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 S1PR2O95136 353 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 SMAD4Q13485 552 aaKnown RBP11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 SFTPCP11686 197 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 MPV17LQ2QL34 196 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 IGSF11Q5DX21 431 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 OR4B1Q8NGF8 309 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 PAXXQ9BUH6 204 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 RBMY1BA6NDE4 496 aaKnown RBP11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 RBMY1EA6NEQ0 496 aaKnown RBP11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 K7ESM1 405 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 RBMY1DP0C7P1 496 aaKnown RBP11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 RBMY1A1P0DJD3 496 aaKnown RBP11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 RBMY1CP0DJD4 496 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 MFAP2P55001 183 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 CCSMST1Q4G0I0 132 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 KIR2DL4Q99706 377 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 GPR27Q9NS67 375 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 SRFP11831 508 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 DLK1P80370 383 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 DHRS2Q13268 280 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 PABPC1L2AQ5JQF8 200 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 PRSS42Q7Z5A4 293 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 GUCD1Q96NT3 240 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 CGB1A6NKQ9 187 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 TSPOP30536 169 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 NCMAPQ5T1S8 102 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 UNQ9370/PRO34162Q6UXP9 181 aa11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 LILRA3Q8N6C8 439 aaPredicted RBP11.7□□□□□ -0.54
SMARCA5-201ENST00000283131 TMEM95Q3KNT9 176 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 OR10AC1Q8NH08 325 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 PSMB11A5LHX3 300 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 NDUFB6O95139 128 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 IL11RAQ14626 422 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 AFMIDQ63HM1 303 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 ZNF774Q6NX45 483 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 ANKRD33Q7Z3H0 272 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 ZNF384Q8TF68 577 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 SIRT7Q9NRC8 400 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 MRC1P22897 1456 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 ZNF32P17041 273 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 ZNF56Q15929 161 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 LSM10Q969L4 123 aaKnown RBP11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 ASB16Q96NS5 453 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 GLRX2Q9NS18 164 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 TMEM272A0A1B0GTI8 110 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 C17orf51A8MQB3 221 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 OR8G5Q8NG78 346 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 PARD6GQ9BYG4 376 aaPredicted RBP11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 SLX4Q8IY92 1834 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 IGKV6-21A0A0C4DH24 114 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 CD81P60033 236 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 POLR2GP62487 172 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 PPP1R1AQ13522 171 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 FAM109BQ6ICB4 259 aaPredicted RBP11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 DNASE2BQ8WZ79 361 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 LINC00470Q9BZP3 86 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 MS4A5Q9H3V2 200 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 IL19Q9UHD0 177 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 MPC1Q9Y5U8 109 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 SNED1Q8TER0 1413 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 MPC2O95563 127 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 FAM106CPP0CH98 169 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 COX6B1P14854 86 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 GZMHP20718 246 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms