RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 INO80EQ8NBZ0 244 aaPredicted RBP8.1□□□□□ -1.11
TRIM55-201ENST00000276573 GLYATL2Q8WU03 294 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 MRPL24Q96A35 216 aaKnown RBP8.1□□□□□ -1.11
TRIM55-201ENST00000276573 UFSP2Q9NUQ7 469 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 ASF1BQ9NVP2 202 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 GSKIPQ9P0R6 139 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 GLS2Q9UI32 602 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 DUSP13Q9UII6 198 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 SVILO95425 2214 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 TUBAL3A6NHL2 446 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 A6NLC8 198 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 HAND1O96004 215 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 FAM87AP0C7U9 286 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 RAB14P61106 215 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 RND3P61587 244 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 NKX6-1P78426 367 aaPredicted RBP8.1□□□□□ -1.11
TRIM55-201ENST00000276573 RAB32Q13637 225 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 IAH1Q2TAA2 248 aaPredicted RBP8.1□□□□□ -1.11
TRIM55-201ENST00000276573 PRSS54Q6PEW0 395 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 ACP7Q6ZNF0 438 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 LGI3Q8N145 548 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 ZNF565Q8N9K5 539 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 SCARB1Q8WTV0 552 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 SECTM1Q8WVN6 248 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 MSI2Q96DH6 328 aaKnown RBP8.1□□□□□ -1.11
TRIM55-201ENST00000276573 C18orf12Q96KH6 178 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 SLC5A7Q9GZV3 580 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 ELOVL5Q9NYP7 299 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 MEMO1Q9Y316 297 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 WIPI2Q9Y4P8 454 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 PRR14LQ5THK1 2151 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 IGKV1D-13A0A0B4J2D9 117 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 KANTRA0A1W2PQU2 76 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 BCL2L11O43521 198 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 IGKV1-13P0DP09 117 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 CD200P41217 278 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 UCNP55089 124 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 PRR30Q53SZ7 412 aaPredicted RBP8.09□□□□□ -1.11
TRIM55-201ENST00000276573 BEX5Q5H9J7 111 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 MOB1BQ7L9L4 216 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 LYZL2Q7Z4W2 148 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 OR2Z1Q8NG97 314 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 PRR7Q8TB68 274 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 PCNPQ8WW12 178 aaKnown RBP8.09□□□□□ -1.11
TRIM55-201ENST00000276573 DCUN1D4Q92564 292 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 USB1Q9BQ65 265 aaKnown RBP8.09□□□□□ -1.11
TRIM55-201ENST00000276573 CABLES2Q9BTV7 478 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 MBNL3Q9NUK0 354 aaKnown RBP8.09□□□□□ -1.11
TRIM55-201ENST00000276573 OR5AC2Q9NZP5 309 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 OR14J1Q9UGF5 321 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 TRAPPC2LQ9UL33 140 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 AUP1Q9Y679 476 aa8.09□□□□□ -1.11
TRIM55-201ENST00000276573 TRAV39A0A0B4J263 110 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 C3orf85A0A1B0GTC6 90 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 LEUTXA8MZ59 168 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 GPR31O00270 319 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 PHF1O43189 567 aaPredicted RBP8.08□□□□□ -1.12
TRIM55-201ENST00000276573 KCNAB3O43448 404 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 PTBP3O95758 552 aaKnown RBP8.08□□□□□ -1.12
TRIM55-201ENST00000276573 CEBPDP49716 269 aaPredicted RBP8.08□□□□□ -1.12
TRIM55-201ENST00000276573 ALKAL2Q6UX46 152 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 ZNF818PQ6ZRF7 136 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 TBC1D26Q86UD7 250 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 H1FOOQ8IZA3 346 aaPredicted RBP8.08□□□□□ -1.12
TRIM55-201ENST00000276573 OR1S1Q8NH92 325 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 OR10J5Q8NHC4 309 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 TMEM171Q8WVE6 324 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 RRNAD1Q96FB5 475 aaKnown RBP8.08□□□□□ -1.12
TRIM55-201ENST00000276573 KIRREL1Q96J84 757 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 CNTNAP3BQ96NU0 1288 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 CITED4Q96RK1 184 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 TP53RKQ96S44 253 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 CNTNAP3Q9BZ76 1288 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 CCL28Q9NRJ3 127 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 JKAMPQ9P055 326 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 TAAR3PQ9P1P4 343 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 TUBD1Q9UJT1 453 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 RAXQ9Y2V3 346 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 OR2W1Q9Y3N9 320 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 SHANK1Q9Y566 2161 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 CFAP47Q6ZTR5 3102 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 ASPMQ8IZT6 3477 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 IGLV3-9A0A075B6K5 115 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 NPIPB11E5RHQ5 1161 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 C16orf97H3BN30 126 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 PSPNO60542 156 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 SPDEFO95238 335 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 CD40P25942 277 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 KLF3P57682 345 aaPredicted RBP8.08□□□□□ -1.12
TRIM55-201ENST00000276573 UBA52P62987 128 aaKnown RBP8.08□□□□□ -1.12
TRIM55-201ENST00000276573 C6orf183Q5T699 404 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 SLC35E4Q6ICL7 350 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 LHFPL5Q8TAF8 219 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 ST8SIA2Q92186 375 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 ARPC5LQ9BPX5 153 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 HEATR1Q9H583 2144 aaKnown RBP8.08□□□□□ -1.12
TRIM55-201ENST00000276573 DNAJB11Q9UBS4 358 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 KIF25Q9UIL4 384 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 SH3BGRL2Q9UJC5 107 aa8.08□□□□□ -1.12
TRIM55-201ENST00000276573 ERRFI1Q9UJM3 462 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms