RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 RELNP78509 3460 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 IGHV3-13P01766 116 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 IGHV3-7P01780 117 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 ARG1P05089 322 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 WNT5AP41221 380 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 NKX2-1P43699 371 aaPredicted RBP14.23□□□□□ -0.13
VPS54-201ENST00000272322 LTC4SQ16873 150 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 RIPPLY2Q5TAB7 128 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 MDP1Q86V88 176 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 TPRX1Q8N7U7 411 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 C10orf35Q96D05 121 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 TMEM100Q9NV29 134 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 ABI3Q9P2A4 366 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 E5RGE8 158 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 CDIPTO14735 213 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 AGFG2O95081 481 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 FBP1P09467 338 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 DTYMKP23919 212 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 F2RL1P55085 397 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 NAAAQ02083 359 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 SLC10A1Q14973 349 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 MOB3AQ96BX8 217 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 C14orf79Q96F83 325 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 RARRES2Q99969 163 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 USB1Q9BQ65 265 aaKnown RBP14.23□□□□□ -0.13
VPS54-201ENST00000272322 OR2J1Q9GZK6 312 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 PURGQ9UJV8 347 aaKnown RBP14.23□□□□□ -0.13
VPS54-201ENST00000272322 NSG2Q9Y328 171 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 IGKV1-6A0A0C4DH72 117 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 GLAP06280 429 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 VAMP2P63027 116 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 SLC25A24Q6NUK1 477 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 ZNF826PQ6ZT77 177 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 SUMF2Q8NBJ7 301 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 DNAJB11Q9UBS4 358 aa14.23□□□□□ -0.13
VPS54-201ENST00000272322 PUS1Q9Y606 427 aaKnown RBP eCLIP14.23□□□□□ -0.13
VPS54-201ENST00000272322 ANKRD30BLA7E2S9 258 aa14.22□□□□□ -0.13
VPS54-201ENST00000272322 SLC34A2O95436 690 aa14.22□□□□□ -0.13
VPS54-201ENST00000272322 HAGHQ16775 308 aa14.22□□□□□ -0.13
VPS54-201ENST00000272322 RTL6Q6ICC9 239 aa14.22□□□□□ -0.13
VPS54-201ENST00000272322 CLCC1Q96S66 551 aa14.22□□□□□ -0.13
VPS54-201ENST00000272322 RCC2Q9P258 522 aaKnown RBP14.22□□□□□ -0.13
VPS54-201ENST00000272322 NKX2-8O15522 239 aa14.22□□□□□ -0.13
VPS54-201ENST00000272322 CRYBA1P05813 215 aa14.22□□□□□ -0.13
VPS54-201ENST00000272322 IAPPP10997 89 aa14.22□□□□□ -0.13
VPS54-201ENST00000272322 OR1K1Q8NGR3 316 aa14.22□□□□□ -0.13
VPS54-201ENST00000272322 OR5C1Q8NGR4 320 aa14.22□□□□□ -0.13
VPS54-201ENST00000272322 LUZP4Q9P127 313 aa14.22□□□□□ -0.13
VPS54-201ENST00000272322 SLC22A20A6NK97 555 aa14.21□□□□□ -0.13
VPS54-201ENST00000272322 CDX4O14627 284 aaPredicted RBP14.21□□□□□ -0.13
VPS54-201ENST00000272322 CCL20P78556 96 aa14.21□□□□□ -0.13
VPS54-201ENST00000272322 ZNF154Q13106 437 aa14.21□□□□□ -0.13
VPS54-201ENST00000272322 APOBEC3DQ96AK3 386 aaPredicted RBP14.21□□□□□ -0.13
VPS54-201ENST00000272322 AKAP13Q12802 2813 aa14.21□□□□□ -0.13
VPS54-201ENST00000272322 SNAPINO95295 136 aa14.21□□□□□ -0.13
VPS54-201ENST00000272322 PEA15Q15121 130 aa14.21□□□□□ -0.13
VPS54-201ENST00000272322 OR2G3Q8NGZ4 309 aa14.21□□□□□ -0.13
VPS54-201ENST00000272322 RXFP4Q8TDU9 374 aa14.21□□□□□ -0.13
VPS54-201ENST00000272322 FAM212BQ9NTI7 297 aaPredicted RBP14.21□□□□□ -0.13
VPS54-201ENST00000272322 KIAA1549Q9HCM3 1950 aa14.21□□□□□ -0.13
VPS54-201ENST00000272322 BORCS7-ASMTA0A0B4J1R7 106 aa14.21□□□□□ -0.14
VPS54-201ENST00000272322 C19orf67A6NJJ6 358 aa14.21□□□□□ -0.14
VPS54-201ENST00000272322 RPL36A-HNRNPH2H7BZ11 118 aa14.21□□□□□ -0.14
VPS54-201ENST00000272322 RRP8O43159 456 aaKnown RBP14.21□□□□□ -0.14
VPS54-201ENST00000272322 DNPH1O43598 174 aa14.21□□□□□ -0.14
VPS54-201ENST00000272322 SPP1P10451 314 aa14.21□□□□□ -0.14
VPS54-201ENST00000272322 CD59P13987 128 aa14.21□□□□□ -0.14
VPS54-201ENST00000272322 SULT1A2P50226 295 aa14.21□□□□□ -0.14
VPS54-201ENST00000272322 EIF5AP63241 154 aaKnown RBP14.21□□□□□ -0.14
VPS54-201ENST00000272322 TMEM267Q0VDI3 215 aaPredicted RBP14.21□□□□□ -0.14
VPS54-201ENST00000272322 DMBX1Q8NFW5 382 aa14.21□□□□□ -0.14
VPS54-201ENST00000272322 ANKRD11Q6UB99 2663 aaPredicted RBP14.2□□□□□ -0.14
VPS54-201ENST00000272322 IGSF23A1L1A6 192 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 CHST1O43916 411 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 SP1P08047 785 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 SP9P0CG40 484 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 EWSR1Q01844 656 aaKnown RBP eCLIP14.2□□□□□ -0.14
VPS54-201ENST00000272322 CCDC71LQ8N9Z2 235 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 RGCCQ9H4X1 137 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 A6NLC8 198 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 TMEM50AO95807 157 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 CTRB1P17538 263 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 LINC00205P59089 165 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 CTRB2Q6GPI1 263 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 SMIM8Q96KF7 97 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 POM121L2Q96KW2 1035 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 A0A0G2JRQ6 117 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 PQLC2LA1A4F0 135 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 H0YL77 283 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 TUSC2O75896 110 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 IL18BPO95998 194 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 CEACAM21Q3KPI0 293 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 UQCC3Q6UW78 93 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 OR2C3Q8N628 320 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 TMEM171Q8WVE6 324 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 SUCNR1Q9BXA5 334 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 TUBD1Q9UJT1 453 aa14.2□□□□□ -0.14
VPS54-201ENST00000272322 PSG2P11465 335 aa14.19□□□□□ -0.14
VPS54-201ENST00000272322 GUK1Q16774 197 aa14.19□□□□□ -0.14
VPS54-201ENST00000272322 RFESDQ8TAC1 157 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms