RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 GTF3AQ92664 365 aaKnown RBP20.62■□□□□ 0.89
SSBP4-201ENST00000270061 BEX2Q9BXY8 128 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 BEX1Q9HBH7 125 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 HES4Q9HCC6 221 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.62■□□□□ 0.893e-7■■■□□ 18.9
SSBP4-201ENST00000270061 MALRD1Q5VYJ5 2156 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 TMEM82A0PJX8 343 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 UBE2QL1A1L167 161 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 VWC2LB2RUY7 222 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 HPXP02790 462 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 RLN1P04808 185 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 USF1P22415 310 aaPredicted RBP20.62■□□□□ 0.89
SSBP4-201ENST00000270061 IKZF1Q13422 519 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 GRK1Q15835 563 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 SRSF7Q16629 238 aaKnown RBP eCLIP20.62■□□□□ 0.89
SSBP4-201ENST00000270061 TMEM249Q2WGJ8 235 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 CHRFAM7AQ494W8 412 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 TERB2Q8NHR7 220 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 MRGPRFQ96AM1 343 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 C12orf4Q9NQ89 552 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 ANXA10Q9UJ72 324 aa20.62■□□□□ 0.89
SSBP4-201ENST00000270061 CD5LO43866 347 aa20.61■□□□□ 0.89
SSBP4-201ENST00000270061 VSIG10L2P0DP72 767 aa20.61■□□□□ 0.89
SSBP4-201ENST00000270061 ZNF146Q15072 292 aa20.61■□□□□ 0.89
SSBP4-201ENST00000270061 TMEM17Q86X19 198 aa20.61■□□□□ 0.89
SSBP4-201ENST00000270061 CCDC107Q8WV48 283 aa20.61■□□□□ 0.89
SSBP4-201ENST00000270061 TAAR3PQ9P1P4 343 aa20.61■□□□□ 0.89
SSBP4-201ENST00000270061 CEACAM18A8MTB9 384 aa20.6■□□□□ 0.89
SSBP4-201ENST00000270061 MCRIP1C9JLW8 97 aa20.6■□□□□ 0.89
SSBP4-201ENST00000270061 FCN2Q15485 313 aa20.6■□□□□ 0.89
SSBP4-201ENST00000270061 ATPAF1Q5TC12 328 aaPredicted RBP20.6■□□□□ 0.89
SSBP4-201ENST00000270061 ZNF626Q68DY1 528 aa20.6■□□□□ 0.89
SSBP4-201ENST00000270061 Q6P435 159 aa20.6■□□□□ 0.89
SSBP4-201ENST00000270061 Q6ZS49 121 aa20.6■□□□□ 0.89
SSBP4-201ENST00000270061 MAFIPQ8WZ33 124 aa20.6■□□□□ 0.89
SSBP4-201ENST00000270061 IGKV1D-8A0A087WSZ0 117 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 CDK10Q15131 360 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 SPIN3Q5JUX0 258 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 LHFPL1Q86WI0 220 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 TCTE3Q8IZS6 198 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 DYRK2Q92630 601 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 DACT3Q96B18 629 aaPredicted RBP20.59■□□□□ 0.89
SSBP4-201ENST00000270061 SEC22CQ9BRL7 303 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 PPA2Q9H2U2 334 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 RANGRFQ9HD47 186 aaPredicted RBP20.59■□□□□ 0.89
SSBP4-201ENST00000270061 ING3Q9NXR8 418 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 PLSCR5A0PG75 271 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 OR2AT4A6NND4 320 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 NXPH2O95156 264 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 NAPSAO96009 420 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 DUSP1P28562 367 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 EIF2B2P49770 351 aaKnown RBP20.59■□□□□ 0.89
SSBP4-201ENST00000270061 WDR82Q6UXN9 313 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 SUMF2Q8NBJ7 301 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 OR2Z1Q8NG97 314 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 BPESC1Q9GZL8 116 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 RIMS4Q9H426 269 aaPredicted RBP20.59■□□□□ 0.89
SSBP4-201ENST00000270061 VSIG4Q9Y279 399 aa20.59■□□□□ 0.89
SSBP4-201ENST00000270061 TRAV24A0A0B4J272 114 aa20.58■□□□□ 0.89
SSBP4-201ENST00000270061 ZSCAN5BA6NJL1 495 aa20.58■□□□□ 0.89
SSBP4-201ENST00000270061 DEGS1O15121 323 aa20.58■□□□□ 0.89
SSBP4-201ENST00000270061 CREBL2O60519 120 aaPredicted RBP20.58■□□□□ 0.89
SSBP4-201ENST00000270061 SULT1A3P0DMM9 295 aa20.58■□□□□ 0.89
SSBP4-201ENST00000270061 SULT1A4P0DMN0 295 aa20.58■□□□□ 0.89
SSBP4-201ENST00000270061 TSPAN5P62079 268 aa20.58■□□□□ 0.89
SSBP4-201ENST00000270061 CD83Q01151 205 aa20.58■□□□□ 0.89
SSBP4-201ENST00000270061 RBM39Q14498 530 aaKnown RBP20.58■□□□□ 0.89
SSBP4-201ENST00000270061 ZNF286AQ9HBT8 521 aa20.58■□□□□ 0.89
SSBP4-201ENST00000270061 EHFQ9NZC4 300 aa20.58■□□□□ 0.89
SSBP4-201ENST00000270061 A8MV72 311 aaPredicted RBP20.57■□□□□ 0.88
SSBP4-201ENST00000270061 ARPC4P59998 168 aa20.57■□□□□ 0.88
SSBP4-201ENST00000270061 MPPED2Q15777 294 aa20.57■□□□□ 0.88
SSBP4-201ENST00000270061 KRTAP21-3Q3LHN1 58 aa20.57■□□□□ 0.88
SSBP4-201ENST00000270061 PRAMEF6Q5VXH4 476 aa20.57■□□□□ 0.88
SSBP4-201ENST00000270061 FIP1L1Q6UN15 594 aaKnown RBP20.57■□□□□ 0.88
SSBP4-201ENST00000270061 TRBV6-6A0A0A6YYG2 114 aa20.57■□□□□ 0.88
SSBP4-201ENST00000270061 POM121CA8CG34 1229 aa20.57■□□□□ 0.88
SSBP4-201ENST00000270061 SSNA1O43805 119 aa20.57■□□□□ 0.88
SSBP4-201ENST00000270061 CFHR2P36980 270 aa20.57■□□□□ 0.88
SSBP4-201ENST00000270061 OR11H7Q8NGC8 314 aa20.57■□□□□ 0.88
SSBP4-201ENST00000270061 SCGB3A2Q96PL1 93 aa20.57■□□□□ 0.88
SSBP4-201ENST00000270061 DPCDQ9BVM2 203 aaPredicted RBP20.57■□□□□ 0.88
SSBP4-201ENST00000270061 YAE1D1Q9NRH1 226 aa20.57■□□□□ 0.88
SSBP4-201ENST00000270061 TREM2Q9NZC2 230 aa20.57■□□□□ 0.88
SSBP4-201ENST00000270061 SVEP1Q4LDE5 3571 aa20.56■□□□□ 0.88
SSBP4-201ENST00000270061 A6NLC8 198 aa20.56■□□□□ 0.88
SSBP4-201ENST00000270061 FAHD2BQ6P2I3 314 aaPredicted RBP20.56■□□□□ 0.88
SSBP4-201ENST00000270061 Q6ZPA2 131 aa20.56■□□□□ 0.88
SSBP4-201ENST00000270061 ZNF826PQ6ZT77 177 aa20.56■□□□□ 0.88
SSBP4-201ENST00000270061 SLC25A42Q86VD7 318 aa20.56■□□□□ 0.88
SSBP4-201ENST00000270061 OR10Z1Q8NGY1 313 aa20.56■□□□□ 0.88
SSBP4-201ENST00000270061 ELMOD3Q96FG2 381 aa20.56■□□□□ 0.88
SSBP4-201ENST00000270061 FAHD2AQ96GK7 314 aa20.56■□□□□ 0.88
SSBP4-201ENST00000270061 FYTTD1Q96QD9 318 aaKnown RBP20.56■□□□□ 0.88
SSBP4-201ENST00000270061 NECAP2Q9NVZ3 263 aa20.56■□□□□ 0.88
SSBP4-201ENST00000270061 IGHV4-61A0A0C4DH41 118 aa20.55■□□□□ 0.88
SSBP4-201ENST00000270061 IGHV3-64DA0A0J9YX35 117 aa20.55■□□□□ 0.88
SSBP4-201ENST00000270061 C17orf100A8MU93 164 aa20.55■□□□□ 0.88
SSBP4-201ENST00000270061 LYNX1G3V0Z9 82 aa20.55■□□□□ 0.88
SSBP4-201ENST00000270061 SH2D1BO14796 132 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms