RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 GNPNAT1Q96EK6 184 aaPredicted RBP23.6■■□□□ 1.37
CBX4-201ENST00000269397 FOXB1Q99853 325 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 TREM2Q9NZC2 230 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 GLIPR1P48060 266 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 RAB11AP62491 216 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 ID3Q02535 119 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 TMEM267Q0VDI3 215 aaPredicted RBP23.6■■□□□ 1.37
CBX4-201ENST00000269397 MPV17LQ2QL34 196 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 FAM185AQ8N0U4 392 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 PLSCR2Q9NRY7 297 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 CRIM1Q9NZV1 1036 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 PI4KAP42356 2102 aa23.6■■□□□ 1.37
CBX4-201ENST00000269397 ZNF816-ZNF321PA0A0X1KG74 233 aa23.59■■□□□ 1.37
CBX4-201ENST00000269397 ZFP92A6NM28 416 aa23.59■■□□□ 1.37
CBX4-201ENST00000269397 RPL36A-HNRNPH2H7BZ11 118 aa23.59■■□□□ 1.37
CBX4-201ENST00000269397 GATCO43716 136 aaKnown RBP23.59■■□□□ 1.37
CBX4-201ENST00000269397 CCNOP22674 350 aa23.59■■□□□ 1.37
CBX4-201ENST00000269397 OR8G5Q8NG78 346 aa23.59■■□□□ 1.37
CBX4-201ENST00000269397 A0A0G2JRQ6 117 aa23.59■■□□□ 1.37
CBX4-201ENST00000269397 PAX9P55771 341 aa23.59■■□□□ 1.37
CBX4-201ENST00000269397 SLC25A24Q6NUK1 477 aa23.59■■□□□ 1.37
CBX4-201ENST00000269397 WDR5BQ86VZ2 330 aa23.59■■□□□ 1.37
CBX4-201ENST00000269397 PTRH2Q9Y3E5 179 aaKnown RBP23.59■■□□□ 1.37
CBX4-201ENST00000269397 IGHV1-45A0A0A0MS14 117 aa23.58■■□□□ 1.37
CBX4-201ENST00000269397 CXCL13O43927 109 aa23.58■■□□□ 1.37
CBX4-201ENST00000269397 TLE4Q04727 773 aa23.58■■□□□ 1.37
CBX4-201ENST00000269397 FAM180AQ6UWF9 173 aa23.58■■□□□ 1.37
CBX4-201ENST00000269397 TAAR3PQ9P1P4 343 aa23.58■■□□□ 1.37
CBX4-201ENST00000269397 VDAC1P21796 283 aa23.58■■□□□ 1.37
CBX4-201ENST00000269397 SSR4P51571 173 aa23.58■■□□□ 1.37
CBX4-201ENST00000269397 RSG1Q9BU20 258 aa23.58■■□□□ 1.37
CBX4-201ENST00000269397 Q9N2K0 584 aa23.58■■□□□ 1.37
CBX4-201ENST00000269397 FAM86C1Q9NVL1 165 aa23.58■■□□□ 1.37
CBX4-201ENST00000269397 CCL2P13500 99 aa23.57■■□□□ 1.36
CBX4-201ENST00000269397 MDKP21741 143 aaPredicted RBP23.57■■□□□ 1.36
CBX4-201ENST00000269397 GPX4P36969 197 aaPredicted RBP23.57■■□□□ 1.36
CBX4-201ENST00000269397 HAAOP46952 286 aa23.57■■□□□ 1.36
CBX4-201ENST00000269397 CARD18P57730 90 aa23.57■■□□□ 1.36
CBX4-201ENST00000269397 NKX6-1P78426 367 aaPredicted RBP23.57■■□□□ 1.36
CBX4-201ENST00000269397 KHDC3LQ587J8 217 aa23.57■■□□□ 1.36
CBX4-201ENST00000269397 OR2T2Q6IF00 324 aa23.57■■□□□ 1.36
CBX4-201ENST00000269397 PCED1AQ9H1Q7 454 aa23.57■■□□□ 1.36
CBX4-201ENST00000269397 FREM1Q5H8C1 2179 aa23.57■■□□□ 1.36
CBX4-201ENST00000269397 IGKV1-6A0A0C4DH72 117 aa23.57■■□□□ 1.36
CBX4-201ENST00000269397 PPP1R2P9O14990 202 aa23.57■■□□□ 1.36
CBX4-201ENST00000269397 UMODP07911 640 aa23.57■■□□□ 1.36
CBX4-201ENST00000269397 FGF8P55075 233 aaPredicted RBP23.57■■□□□ 1.36
CBX4-201ENST00000269397 HLA-DRB3P79483 266 aa23.57■■□□□ 1.36
CBX4-201ENST00000269397 ABHD5Q8WTS1 349 aa23.57■■□□□ 1.36
CBX4-201ENST00000269397 FRZBQ92765 325 aa23.57■■□□□ 1.36
CBX4-201ENST00000269397 ATP5SQ99766 215 aa23.57■■□□□ 1.36
CBX4-201ENST00000269397 VSIRQ9H7M9 311 aa23.57■■□□□ 1.36
CBX4-201ENST00000269397 TRGC1P0CF51 173 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 CD200P41217 278 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 RAC3P60763 192 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 DEFA6Q01524 100 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 CPT1CQ8TCG5 803 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 LY6G6EA0A0G2JKS1 128 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 GPM6AP51674 278 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 C9orf135Q5VTT2 229 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 LCN15Q6UWW0 184 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 CPEB3Q8NE35 698 aaKnown RBP23.56■■□□□ 1.36
CBX4-201ENST00000269397 OR51H1Q8NH63 302 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 DNASE2BQ8WZ79 361 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 PRDM13Q9H4Q3 707 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 RNF115Q9Y4L5 304 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 U3KQA8 63 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 FABP4P15090 132 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 UCP1P25874 307 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 TAS2R30P59541 319 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 HIST3H2BBQ8N257 126 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 RBMXL1Q96E39 390 aaKnown RBP23.56■■□□□ 1.36
CBX4-201ENST00000269397 FGF23Q9GZV9 251 aaPredicted RBP23.56■■□□□ 1.36
CBX4-201ENST00000269397 ZNF665Q9H7R5 613 aa23.56■■□□□ 1.36
CBX4-201ENST00000269397 ZNF716A6NP11 495 aa23.55■■□□□ 1.36
CBX4-201ENST00000269397 SEC14L6B5MCN3 397 aa23.55■■□□□ 1.36
CBX4-201ENST00000269397 COX6A1P12074 109 aa23.55■■□□□ 1.36
CBX4-201ENST00000269397 SLC35E3Q7Z769 313 aa23.55■■□□□ 1.36
CBX4-201ENST00000269397 IMMP1LQ96LU5 166 aa23.55■■□□□ 1.36
CBX4-201ENST00000269397 YKT6O15498 198 aa23.55■■□□□ 1.36
CBX4-201ENST00000269397 BAXQ07812 192 aa23.55■■□□□ 1.36
CBX4-201ENST00000269397 KRTAP27-1Q3LI81 207 aa23.55■■□□□ 1.36
CBX4-201ENST00000269397 OR56B2PQ8NGI1 322 aa23.55■■□□□ 1.36
CBX4-201ENST00000269397 S100PBPQ96BU1 408 aa23.55■■□□□ 1.36
CBX4-201ENST00000269397 NCKAP5O14513 1909 aa23.54■■□□□ 1.36
CBX4-201ENST00000269397 LOC102723971A0A1B0GUV8 181 aa23.54■■□□□ 1.36
CBX4-201ENST00000269397 CBR3O75828 277 aa23.54■■□□□ 1.36
CBX4-201ENST00000269397 F10P00742 488 aa23.54■■□□□ 1.36
CBX4-201ENST00000269397 IGFBP4P22692 258 aa23.54■■□□□ 1.36
CBX4-201ENST00000269397 FAM210BQ96KR6 192 aa23.54■■□□□ 1.36
CBX4-201ENST00000269397 SSX3Q99909 188 aa23.54■■□□□ 1.36
CBX4-201ENST00000269397 SIRT7Q9NRC8 400 aa23.54■■□□□ 1.36
CBX4-201ENST00000269397 RPS19BP1Q86WX3 136 aaKnown RBP23.54■■□□□ 1.36
CBX4-201ENST00000269397 SF3B5Q9BWJ5 86 aaKnown RBP23.54■■□□□ 1.36
CBX4-201ENST00000269397 RPRMQ9NS64 109 aa23.54■■□□□ 1.36
CBX4-201ENST00000269397 CXorf65A6NEN9 183 aa23.53■■□□□ 1.36
CBX4-201ENST00000269397 RFPL3SP0C7P2 107 aa23.53■■□□□ 1.36
CBX4-201ENST00000269397 PLA2G5P39877 138 aa23.53■■□□□ 1.36
CBX4-201ENST00000269397 GAMTQ14353 236 aa23.53■■□□□ 1.36
CBX4-201ENST00000269397 FAM90A2PQ658T7 463 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms