RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 GAL3ST2Q9H3Q3 398 aa12.4□□□□□ -0.42
PDLIM2-201ENST00000265810 ZNF705EA8MWA4 302 aaPredicted RBP12.4□□□□□ -0.43
PDLIM2-201ENST00000265810 UBA52P62987 128 aaKnown RBP12.4□□□□□ -0.43
PDLIM2-201ENST00000265810 HBG1P69891 147 aa12.4□□□□□ -0.43
PDLIM2-201ENST00000265810 HBG2P69892 147 aa12.4□□□□□ -0.43
PDLIM2-201ENST00000265810 AQP3Q92482 292 aa12.4□□□□□ -0.43
PDLIM2-201ENST00000265810 NAA60Q9H7X0 242 aa12.4□□□□□ -0.43
PDLIM2-201ENST00000265810 ZDHHC8Q9ULC8 765 aa12.4□□□□□ -0.43
PDLIM2-201ENST00000265810 IGKV1-9A0A0C4DH69 117 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 C3orf85A0A1B0GTC6 90 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 SSSCA1O60232 199 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 DUS4LO95620 317 aaKnown RBP12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 GYPAP02724 150 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 HLA-DRB3P79483 266 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 BSPH1Q075Z2 132 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 SDSLQ96GA7 329 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 E9PLN8 166 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 MMP7P09237 267 aaPredicted RBP12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 NKX6-1P78426 367 aaPredicted RBP12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 ZNF154Q13106 437 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 SPAG16Q8N0X2 631 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 DIRC2Q96SL1 478 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 VKORC1Q9BQB6 163 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 CCL28Q9NRJ3 127 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 SHOXO15266 292 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 DKK1O94907 266 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 CTSDP07339 412 aaPredicted RBP12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 SPANXN5Q5MJ07 72 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 SLC51BQ86UW2 128 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 CD300LFQ8TDQ1 290 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 RASL12Q9NYN1 266 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 FER1L5A0AVI2 2057 aa12.39□□□□□ -0.43
PDLIM2-201ENST00000265810 C5orf63A6NC05 138 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 ADAP1O75689 374 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 RHBDL1O75783 438 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 SLC7A5P1Q8MH63 180 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 SDHAF2Q9NX18 166 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 PRELID1Q9Y255 219 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 FCGR3BO75015 233 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 CNIH1O95406 144 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 COX7A1P24310 79 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 IGSF11Q5DX21 431 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 IGFL3Q6UXB1 125 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 SDHCQ99643 169 aaPredicted RBP12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 LAMP3Q9UQV4 416 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 FBXO7Q9Y3I1 522 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 NKX2-6A6NCS4 301 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 C1QTNF9BB2RNN3 333 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 E9PQ18 207 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 CYB5R3P00387 301 aaPredicted RBP12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 C1QTNF9P0C862 333 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 IAPPP10997 89 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 PDLIM3Q53GG5 364 aaPredicted RBP12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 CLEC18BQ6UXF7 455 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 GAPTQ8N292 157 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 PNRC2Q9NPJ4 139 aaKnown RBP12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 SURF2Q15527 256 aaPredicted RBP12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 PRR30Q53SZ7 412 aaPredicted RBP12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 ACOT7LQ6ZUV0 252 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 SAXO1Q8IYX7 474 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 TCTE3Q8IZS6 198 aa12.38□□□□□ -0.43
PDLIM2-201ENST00000265810 M0R036 132 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 SCTP09683 121 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 RPUSD3Q6P087 351 aaKnown RBP12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 ADAD2Q8NCV1 583 aaKnown RBP12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 CNTNAP3BQ96NU0 1288 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 TMEM131Q92545 1883 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 WNT9BO14905 357 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 CXCL3P19876 107 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 CCL1P22362 96 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 BTNL3Q6UXE8 466 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 PAQR4Q8N4S7 273 aaPredicted RBP12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 TMEM171Q8WVE6 324 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 SLC2A9Q9NRM0 540 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 C5orf42Q9H799 3197 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 H0YL77 283 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 H3BP45 60 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 RCC1P18754 421 aaPredicted RBP12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 LPAR6P43657 344 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 MOB3BQ86TA1 216 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 COMMD7Q86VX2 200 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 MUC15Q8N387 334 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 OR4A4PQ8NGN8 299 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 HRH4Q9H3N8 390 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 HSF4Q9ULV5 492 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM90A10PA6NDY2 464 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM90A18PA6NE21 464 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM90A16PA6NEW6 464 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM90A20PA6NIJ5 464 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM90A8PA6NJQ4 464 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM90A7PA6NKC0 464 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM90A22PA8MWA6 464 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM90A12PA8MX19 464 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 A8MXE2 369 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM90A5PA8MXJ8 464 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM90A23PA8MXZ1 464 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM90A15PP0C7V4 464 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM90A13PP0C7W8 464 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM90A14PP0C7W9 464 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM90A24PP0C7X0 464 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms