RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 MELTFP08582 738 aa17.19■□□□□ 0.34
CSPG5-201ENST00000264723 METTL15P1P0C7V9 234 aa17.19■□□□□ 0.34
CSPG5-201ENST00000264723 NDUFB7P17568 137 aa17.19■□□□□ 0.34
CSPG5-201ENST00000264723 BCL3P20749 454 aa17.19■□□□□ 0.34
CSPG5-201ENST00000264723 SRPXP78539 464 aa17.19■□□□□ 0.34
CSPG5-201ENST00000264723 ZNF154Q13106 437 aa17.19■□□□□ 0.34
CSPG5-201ENST00000264723 SPRY3O43610 288 aa17.18■□□□□ 0.34
CSPG5-201ENST00000264723 MSMO1Q15800 293 aa17.18■□□□□ 0.34
CSPG5-201ENST00000264723 PMS2P1A4D2B8 440 aa17.18■□□□□ 0.34
CSPG5-201ENST00000264723 CXorf66Q5JRM2 361 aaPredicted RBP17.18■□□□□ 0.34
CSPG5-201ENST00000264723 TIPARPQ7Z3E1 657 aaKnown RBP17.18■□□□□ 0.34
CSPG5-201ENST00000264723 FAM58AQ8N1B3 248 aa17.18■□□□□ 0.34
CSPG5-201ENST00000264723 TMEM105Q8N8V8 129 aa17.18■□□□□ 0.34
CSPG5-201ENST00000264723 FRZBQ92765 325 aa17.18■□□□□ 0.34
CSPG5-201ENST00000264723 SIGLEC12Q96PQ1 595 aa17.18■□□□□ 0.34
CSPG5-201ENST00000264723 OR5B12Q96R08 314 aa17.18■□□□□ 0.34
CSPG5-201ENST00000264723 TINAGQ9UJW2 476 aa17.18■□□□□ 0.34
CSPG5-201ENST00000264723 PCDH15Q96QU1 1955 aa17.18■□□□□ 0.34
CSPG5-201ENST00000264723 ZNF705GA8MUZ8 300 aaPredicted RBP17.18■□□□□ 0.34
CSPG5-201ENST00000264723 PRRG2O14669 202 aa17.18■□□□□ 0.34
CSPG5-201ENST00000264723 CDIPTO14735 213 aa17.18■□□□□ 0.34
CSPG5-201ENST00000264723 CHST1O43916 411 aa17.18■□□□□ 0.34
CSPG5-201ENST00000264723 KRASP01116 189 aa17.18■□□□□ 0.34
CSPG5-201ENST00000264723 OR2Z1Q8NG97 314 aa17.18■□□□□ 0.34
CSPG5-201ENST00000264723 RPUSD4Q96CM3 377 aaKnown RBP17.18■□□□□ 0.34
CSPG5-201ENST00000264723 CYB5BO43169 146 aa17.17■□□□□ 0.34
CSPG5-201ENST00000264723 IFNA10P01566 189 aa17.17■□□□□ 0.34
CSPG5-201ENST00000264723 ZNF239Q16600 458 aaKnown RBP17.17■□□□□ 0.34
CSPG5-201ENST00000264723 TMEM100Q9NV29 134 aa17.17■□□□□ 0.34
CSPG5-201ENST00000264723 DNAH14Q0VDD8 3507 aa17.17■□□□□ 0.34
CSPG5-201ENST00000264723 ZNF727A8MUV8 499 aa17.17■□□□□ 0.34
CSPG5-201ENST00000264723 DEFB108AA8MXU0 73 aa17.17■□□□□ 0.34
CSPG5-201ENST00000264723 MKRN2OSH3BPM6 223 aa17.17■□□□□ 0.34
CSPG5-201ENST00000264723 TERTO14746 1132 aaKnown RBP17.17■□□□□ 0.34
CSPG5-201ENST00000264723 MPPED1O15442 326 aa17.17■□□□□ 0.34
CSPG5-201ENST00000264723 SCTP09683 121 aa17.17■□□□□ 0.34
CSPG5-201ENST00000264723 SPINK9Q5DT21 86 aa17.17■□□□□ 0.34
CSPG5-201ENST00000264723 CST9LP1Q5W188 147 aa17.17■□□□□ 0.34
CSPG5-201ENST00000264723 ZNF561Q8N587 486 aa17.17■□□□□ 0.34
CSPG5-201ENST00000264723 C3orf80F5H4A9 247 aa17.17■□□□□ 0.34
CSPG5-201ENST00000264723 ZIC3O60481 467 aa17.17■□□□□ 0.34
CSPG5-201ENST00000264723 PPP1CCP36873 323 aaKnown RBP17.17■□□□□ 0.34
CSPG5-201ENST00000264723 ENDOGQ14249 297 aaKnown RBP17.17■□□□□ 0.34
CSPG5-201ENST00000264723 KIF26AQ9ULI4 1882 aaPredicted RBP17.17■□□□□ 0.34
CSPG5-201ENST00000264723 IGLV3-12A0A075B6K2 115 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 SPINT2O43291 252 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 MEOX2P50222 304 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 DYNLT3P51808 116 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 POC1AQ8NBT0 407 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 LYZL4Q96KX0 146 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 IMMP1LQ96LU5 166 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 SLC35B3Q9H1N7 401 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 MUC6Q6W4X9 2439 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 A0A1W2PNV4 684 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 LDLRAD4O15165 306 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 OR10V1Q8NGI7 309 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 GAB2Q9UQC2 676 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 SUCLG1P53597 346 aaKnown RBP17.16■□□□□ 0.34
CSPG5-201ENST00000264723 NAAAQ02083 359 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 MZT1Q08AG7 82 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 ZNF441Q8N8Z8 693 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 DOCK10Q96BY6 2186 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 E9PLN8 166 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 IFNA1P01562 189 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 CTXN2P0C2S0 81 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 PRF1P14222 555 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 TREM2Q9NZC2 230 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 TMED3Q9Y3Q3 217 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 WSB1Q9Y6I7 421 aa17.16■□□□□ 0.34
CSPG5-201ENST00000264723 MDKP21741 143 aaPredicted RBP17.15■□□□□ 0.34
CSPG5-201ENST00000264723 EWSR1Q01844 656 aaKnown RBP eCLIP17.15■□□□□ 0.34
CSPG5-201ENST00000264723 HEYLQ9NQ87 328 aaPredicted RBP17.15■□□□□ 0.34
CSPG5-201ENST00000264723 RCC2Q9P258 522 aaKnown RBP17.15■□□□□ 0.34
CSPG5-201ENST00000264723 PRSS50Q9UI38 385 aa17.15■□□□□ 0.34
CSPG5-201ENST00000264723 DEDDO75618 318 aa17.15■□□□□ 0.34
CSPG5-201ENST00000264723 BAXQ07812 192 aa17.15■□□□□ 0.34
CSPG5-201ENST00000264723 ZNF816Q0VGE8 651 aaPredicted RBP17.15■□□□□ 0.34
CSPG5-201ENST00000264723 LINC00518Q8N0U6 118 aa17.15■□□□□ 0.34
CSPG5-201ENST00000264723 AQP10Q96PS8 301 aa17.15■□□□□ 0.34
CSPG5-201ENST00000264723 RARRES2Q99969 163 aa17.15■□□□□ 0.34
CSPG5-201ENST00000264723 PIGBOS1A0A0B4J2F0 54 aa17.15■□□□□ 0.34
CSPG5-201ENST00000264723 FBP1P09467 338 aa17.15■□□□□ 0.34
CSPG5-201ENST00000264723 ATP6V0CP27449 155 aa17.15■□□□□ 0.34
CSPG5-201ENST00000264723 PPP1CBP62140 327 aa17.15■□□□□ 0.34
CSPG5-201ENST00000264723 SURF2Q15527 256 aaPredicted RBP17.15■□□□□ 0.34
CSPG5-201ENST00000264723 OR1K1Q8NGR3 316 aa17.15■□□□□ 0.34
CSPG5-201ENST00000264723 MSL2Q9HCI7 577 aa17.15■□□□□ 0.34
CSPG5-201ENST00000264723 GPR27Q9NS67 375 aa17.15■□□□□ 0.34
CSPG5-201ENST00000264723 OSGIN2Q9Y236 505 aa17.15■□□□□ 0.34
CSPG5-201ENST00000264723 ZNF17P17021 662 aa17.14■□□□□ 0.33
CSPG5-201ENST00000264723 SULT1A2P50226 295 aa17.14■□□□□ 0.33
CSPG5-201ENST00000264723 ZNF429Q86V71 674 aa17.14■□□□□ 0.33
CSPG5-201ENST00000264723 OR4A4PQ8NGN8 299 aa17.14■□□□□ 0.33
CSPG5-201ENST00000264723 BSCL2Q96G97 398 aaPredicted RBP17.14■□□□□ 0.33
CSPG5-201ENST00000264723 IGHV3-43A0A0B4J1X8 118 aa17.14■□□□□ 0.33
CSPG5-201ENST00000264723 A0A0U1RQV5 110 aa17.14■□□□□ 0.33
CSPG5-201ENST00000264723 KLF7O75840 302 aaPredicted RBP17.14■□□□□ 0.33
CSPG5-201ENST00000264723 IGHV3-43DP0DP04 118 aa17.14■□□□□ 0.33
CSPG5-201ENST00000264723 SUPT4H1P63272 117 aaKnown RBP17.14■□□□□ 0.33
CSPG5-201ENST00000264723 CACNG5Q9UF02 275 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms