RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 C11orf44Q8N8P7 122 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 SUMF2Q8NBJ7 301 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 OR9G1Q8NH87 305 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 DPCDQ9BVM2 203 aaPredicted RBP12.9□□□□□ -0.34
USE1-201ENST00000263897 VCXQ9H320 206 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 FKBP14Q9NWM8 211 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 CALYQ9NYX4 217 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 ZNF581Q9P0T4 197 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 A0A1W2PPK0 400 aa12.89□□□□□ -0.35
USE1-201ENST00000263897 MAGEA13PA6NCF6 341 aa12.89□□□□□ -0.35
USE1-201ENST00000263897 NPIPB11E5RHQ5 1161 aa12.89□□□□□ -0.35
USE1-201ENST00000263897 GEMIN2O14893 280 aaKnown RBP12.89□□□□□ -0.35
USE1-201ENST00000263897 OR7C1O76099 320 aaPredicted RBP12.89□□□□□ -0.35
USE1-201ENST00000263897 CSF1P09603 554 aa12.89□□□□□ -0.35
USE1-201ENST00000263897 CELP19835 753 aa12.89□□□□□ -0.35
USE1-201ENST00000263897 FSTP19883 344 aa12.89□□□□□ -0.35
USE1-201ENST00000263897 SERPINA2P20848 420 aa12.89□□□□□ -0.35
USE1-201ENST00000263897 WNT4P56705 351 aa12.89□□□□□ -0.35
USE1-201ENST00000263897 TPTE2P1Q5T6R2 138 aa12.89□□□□□ -0.35
USE1-201ENST00000263897 Q6ZS46 218 aa12.89□□□□□ -0.35
USE1-201ENST00000263897 FAM110DQ8TAY7 271 aaPredicted RBP12.89□□□□□ -0.35
USE1-201ENST00000263897 OR14A2Q96R54 314 aa12.89□□□□□ -0.35
USE1-201ENST00000263897 IDI2-AS1Q9NZ38 188 aa12.89□□□□□ -0.35
USE1-201ENST00000263897 NKX1-2Q9UD57 310 aaPredicted RBP12.89□□□□□ -0.35
USE1-201ENST00000263897 PNMA8CA0A1B0GUJ8 204 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 OOSP1A8MZH6 123 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 J3QR06 171 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 MYL12BO14950 172 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 IL1AP01583 271 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 GTF2F2P13984 249 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 GZMHP20718 246 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 CD24P25063 80 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 ARHGDIBP52566 201 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 DOC2BQ14184 412 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 GPR176Q14439 515 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 SLC22A6Q4U2R8 563 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 HIST2H2BDQ6DRA6 164 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 C16orf82Q7Z2V1 217 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 LINC00596Q86U02 117 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 CDH26Q8IXH8 852 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 OR10A7Q8NGE5 316 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 RFESDQ8TAC1 157 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 MRGPRDQ8TDS7 321 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 ERGIC3Q9Y282 383 aa12.88□□□□□ -0.35
USE1-201ENST00000263897 TRAV39A0A0B4J263 110 aa12.87□□□□□ -0.35
USE1-201ENST00000263897 A0A1W2PP11 408 aa12.87□□□□□ -0.35
USE1-201ENST00000263897 PIN1P1O15428 100 aa12.87□□□□□ -0.35
USE1-201ENST00000263897 MAS1P04201 325 aa12.87□□□□□ -0.35
USE1-201ENST00000263897 RBM39Q14498 530 aaKnown RBP12.87□□□□□ -0.35
USE1-201ENST00000263897 MPV17LQ2QL34 196 aa12.87□□□□□ -0.35
USE1-201ENST00000263897 ATAD3CQ5T2N8 411 aa12.87□□□□□ -0.35
USE1-201ENST00000263897 RNLSQ5VYX0 342 aa12.87□□□□□ -0.35
USE1-201ENST00000263897 SLC16A12Q6ZSM3 486 aa12.87□□□□□ -0.35
USE1-201ENST00000263897 WIPF2Q8TF74 440 aaPredicted RBP12.87□□□□□ -0.35
USE1-201ENST00000263897 MUL1Q969V5 352 aa12.87□□□□□ -0.35
USE1-201ENST00000263897 MRPS24Q96EL2 167 aaKnown RBP12.87□□□□□ -0.35
USE1-201ENST00000263897 AKR1E2Q96JD6 320 aa12.87□□□□□ -0.35
USE1-201ENST00000263897 DERL3Q96Q80 235 aa12.87□□□□□ -0.35
USE1-201ENST00000263897 WNT10AQ9GZT5 417 aa12.87□□□□□ -0.35
USE1-201ENST00000263897 MMP28Q9H239 520 aa12.87□□□□□ -0.35
USE1-201ENST00000263897 LIN7BQ9HAP6 207 aa12.87□□□□□ -0.35
USE1-201ENST00000263897 PSG11Q9UQ72 335 aa12.87□□□□□ -0.35
USE1-201ENST00000263897 MRPS28Q9Y2Q9 187 aaKnown RBP12.87□□□□□ -0.35
USE1-201ENST00000263897 PTGES3LE9PB15 166 aa12.86□□□□□ -0.35
USE1-201ENST00000263897 IGHV3-7P01780 117 aa12.86□□□□□ -0.35
USE1-201ENST00000263897 CDK1P06493 297 aa12.86□□□□□ -0.35
USE1-201ENST00000263897 MNDAP41218 407 aa12.86□□□□□ -0.35
USE1-201ENST00000263897 ARSJQ5FYB0 599 aaPredicted RBP12.86□□□□□ -0.35
USE1-201ENST00000263897 C6orf141Q5SZD1 244 aa12.86□□□□□ -0.35
USE1-201ENST00000263897 CCDC144NLQ6NUI1 221 aa12.86□□□□□ -0.35
USE1-201ENST00000263897 GLIPR1L1Q6UWM5 242 aa12.86□□□□□ -0.35
USE1-201ENST00000263897 LYPD6Q86Y78 171 aa12.86□□□□□ -0.35
USE1-201ENST00000263897 JAGN1Q8N5M9 183 aa12.86□□□□□ -0.35
USE1-201ENST00000263897 LEAP2Q969E1 77 aa12.86□□□□□ -0.35
USE1-201ENST00000263897 OR5M11Q96RB7 305 aa12.86□□□□□ -0.35
USE1-201ENST00000263897 OCSTAMPQ9BR26 566 aa12.86□□□□□ -0.35
USE1-201ENST00000263897 NOTCH3Q9UM47 2321 aa12.86□□□□□ -0.35
USE1-201ENST00000263897 TMEM30CPA0ZSE6 113 aa12.85□□□□□ -0.35
USE1-201ENST00000263897 PEX14O75381 377 aa12.85□□□□□ -0.35
USE1-201ENST00000263897 FBXO24O75426 580 aa12.85□□□□□ -0.35
USE1-201ENST00000263897 OR2F2O95006 317 aa12.85□□□□□ -0.35
USE1-201ENST00000263897 MT-ND4P03905 459 aa12.85□□□□□ -0.35
USE1-201ENST00000263897 CD28P10747 220 aa12.85□□□□□ -0.35
USE1-201ENST00000263897 SSTR5P35346 364 aa12.85□□□□□ -0.35
USE1-201ENST00000263897 EMX1Q04741 257 aaPredicted RBP12.85□□□□□ -0.35
USE1-201ENST00000263897 LTC4SQ16873 150 aa12.85□□□□□ -0.35
USE1-201ENST00000263897 UNQ9370/PRO34162Q6UXP9 181 aa12.85□□□□□ -0.35
USE1-201ENST00000263897 THNSL2Q86YJ6 484 aa12.85□□□□□ -0.35
USE1-201ENST00000263897 CAPSLQ8WWF8 208 aa12.85□□□□□ -0.35
USE1-201ENST00000263897 THRSPQ92748 146 aa12.85□□□□□ -0.35
USE1-201ENST00000263897 MYDGFQ969H8 173 aa12.85□□□□□ -0.35
USE1-201ENST00000263897 RBM14Q96PK6 669 aaKnown RBP12.85□□□□□ -0.35
USE1-201ENST00000263897 SLC25A33Q9BSK2 321 aa12.85□□□□□ -0.35
USE1-201ENST00000263897 AMMECR1Q9Y4X0 333 aaPredicted RBP12.85□□□□□ -0.35
USE1-201ENST00000263897 FAM90A18PA6NE21 464 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 FAM90A16PA6NEW6 464 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 FAM90A20PA6NIJ5 464 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 FAM90A9PA6NNJ1 464 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 FAM90A12PA8MX19 464 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 FAM90A5PA8MXJ8 464 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms