RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 PPP1R2P9O14990 202 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 TFF1P04155 84 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 SRP19P09132 144 aaKnown RBP11.19□□□□□ -0.62
SNX1-201ENST00000261889 G0S2P27469 103 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 RAB5CP51148 216 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 GPM6AP51674 278 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 SSX9Q7RTT3 188 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 ODF3L1Q8IXM7 274 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 ZNF611Q8N823 705 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 NABP1Q96AH0 204 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 PRDM13Q9H4Q3 707 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 A0A1W2PR77 199 aa11.18□□□□□ -0.62
SNX1-201ENST00000261889 RBP2P50120 134 aa11.18□□□□□ -0.62
SNX1-201ENST00000261889 SHBQ15464 509 aa11.18□□□□□ -0.62
SNX1-201ENST00000261889 ABHD3Q8WU67 409 aa11.18□□□□□ -0.62
SNX1-201ENST00000261889 MRGPRX4Q96LA9 322 aa11.18□□□□□ -0.62
SNX1-201ENST00000261889 SYT3Q9BQG1 590 aa11.18□□□□□ -0.62
SNX1-201ENST00000261889 ELOVL1Q9BW60 279 aa11.18□□□□□ -0.62
SNX1-201ENST00000261889 MPPED1O15442 326 aa11.18□□□□□ -0.62
SNX1-201ENST00000261889 HOXA5P20719 270 aa11.18□□□□□ -0.62
SNX1-201ENST00000261889 BCL3P20749 454 aa11.18□□□□□ -0.62
SNX1-201ENST00000261889 GRB2P62993 217 aaKnown RBP11.18□□□□□ -0.62
SNX1-201ENST00000261889 ADIRFQ15847 76 aa11.18□□□□□ -0.62
SNX1-201ENST00000261889 SPATA46Q5T0L3 261 aa11.18□□□□□ -0.62
SNX1-201ENST00000261889 OSR2Q8N2R0 312 aa11.18□□□□□ -0.62
SNX1-201ENST00000261889 NIPSNAP3BQ9BS92 247 aa11.18□□□□□ -0.62
SNX1-201ENST00000261889 FOXD3Q9UJU5 478 aaPredicted RBP11.18□□□□□ -0.62
SNX1-201ENST00000261889 CEBPZOSA8MTT3 80 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 TLX3O43711 291 aaPredicted RBP11.17□□□□□ -0.62
SNX1-201ENST00000261889 HOXB1P14653 301 aaPredicted RBP11.17□□□□□ -0.62
SNX1-201ENST00000261889 HNF1AP20823 631 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 LINC00205P59089 165 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 OR8G2PQ6IF36 304 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 LYPD6BQ8NI32 183 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 RHBDD1Q8TEB9 315 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 C18orf12Q96KH6 178 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 TAAR9Q96RI9 348 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 TMEM204Q9BSN7 226 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 PLK3Q9H4B4 646 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 LRFN1Q9P244 771 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 DKKL1Q9UK85 242 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 ADGRG4Q8IZF6 3080 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 AQP7P3A6NL99 342 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 CXCL13O43927 109 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 SELLP14151 372 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 CD27P26842 260 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 CDX1P47902 265 aaPredicted RBP11.17□□□□□ -0.62
SNX1-201ENST00000261889 LSM6P62312 80 aaKnown RBP11.17□□□□□ -0.62
SNX1-201ENST00000261889 C20orf204Q6ZNR8 217 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 ZDHHC23Q8IYP9 409 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 SPACA9Q96E40 222 aaPredicted RBP11.17□□□□□ -0.62
SNX1-201ENST00000261889 PPP1R3CQ9UQK1 317 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 A0A0U1RQK1 487 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 CCR5P51681 352 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 RHEBQ15382 184 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 EXTL1Q92935 676 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 MOB1AQ9H8S9 216 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 ZNF286AQ9HBT8 521 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 FBLN5Q9UBX5 448 aa11.17□□□□□ -0.62
SNX1-201ENST00000261889 RBM7Q9Y580 266 aaKnown RBP11.17□□□□□ -0.62
SNX1-201ENST00000261889 A0A087WZY1 265 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 LILRA1O75019 489 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 RFPL3SP0C7P2 107 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 CASP6P55212 293 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 P2RY6Q15077 328 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 CEACAM16Q2WEN9 425 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 ZNF385CQ66K41 422 aaPredicted RBP11.16□□□□□ -0.62
SNX1-201ENST00000261889 Q6ZRM9 215 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 TMEM37Q8WXS4 190 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 PCED1AQ9H1Q7 454 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 HEATR1Q9H583 2144 aaKnown RBP11.16□□□□□ -0.62
SNX1-201ENST00000261889 TACC2O95359 2948 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 A0A087X0M5 115 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 A0A1B0GX30 115 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 A0A1W2PNV4 684 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 ZFAND5O76080 213 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 ARL16Q0P5N6 197 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 MALLQ13021 153 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 HERPUD1Q15011 391 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 STX12Q86Y82 276 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 MISP3Q96FF7 219 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 FAM210BQ96KR6 192 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 RPRMQ9NS64 109 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 A0A1W2PQM1 296 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 PDGFBP01127 241 aaPredicted RBP11.16□□□□□ -0.62
SNX1-201ENST00000261889 CD200P41217 278 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 PSG4Q00888 419 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 PMP22Q01453 160 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 ZIC4Q8N9L1 334 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 PACRGQ96M98 296 aaPredicted RBP11.16□□□□□ -0.62
SNX1-201ENST00000261889 GFOD1Q9NXC2 390 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 RNF150Q9ULK6 438 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 SIT1Q9Y3P8 196 aa11.16□□□□□ -0.62
SNX1-201ENST00000261889 ZNF816-ZNF321PA0A0X1KG74 233 aa11.15□□□□□ -0.62
SNX1-201ENST00000261889 ZNF729A6NN14 1252 aaPredicted RBP11.15□□□□□ -0.62
SNX1-201ENST00000261889 PSG2P11465 335 aa11.15□□□□□ -0.62
SNX1-201ENST00000261889 CCL7P80098 99 aa11.15□□□□□ -0.62
SNX1-201ENST00000261889 LURAP1LQ8IV03 231 aa11.15□□□□□ -0.62
SNX1-201ENST00000261889 SPTSSAQ969W0 71 aa11.15□□□□□ -0.62
SNX1-201ENST00000261889 CHCHD2Q9Y6H1 151 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms