RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 GLP1RP43220 463 aa18.82■□□□□ 0.6
SIX3-201ENST00000260653 SUPT4H1P63272 117 aaKnown RBP18.82■□□□□ 0.6
SIX3-201ENST00000260653 LILRB4Q8NHJ6 448 aa18.82■□□□□ 0.6
SIX3-201ENST00000260653 RANBP3Q9H6Z4 567 aaPredicted RBP18.82■□□□□ 0.6
SIX3-201ENST00000260653 C14orf166Q9Y224 244 aaKnown RBP18.82■□□□□ 0.6
SIX3-201ENST00000260653 TRAV39A0A0B4J263 110 aa18.82■□□□□ 0.6
SIX3-201ENST00000260653 RFPL4AA6NLU0 287 aa18.82■□□□□ 0.6
SIX3-201ENST00000260653 RFPL4AL1F8VTS6 287 aa18.82■□□□□ 0.6
SIX3-201ENST00000260653 BET1O15155 118 aa18.82■□□□□ 0.6
SIX3-201ENST00000260653 DUS4LO95620 317 aaKnown RBP18.82■□□□□ 0.6
SIX3-201ENST00000260653 MDH2P40926 338 aaKnown RBP18.82■□□□□ 0.6
SIX3-201ENST00000260653 ECI1P42126 302 aa18.82■□□□□ 0.6
SIX3-201ENST00000260653 LY6G6FQ5SQ64 297 aa18.82■□□□□ 0.6
SIX3-201ENST00000260653 ZNF497Q6ZNH5 498 aa18.82■□□□□ 0.6
SIX3-201ENST00000260653 LINC01560Q8TB33 94 aa18.82■□□□□ 0.6
SIX3-201ENST00000260653 PHB2Q99623 299 aa18.82■□□□□ 0.6
SIX3-201ENST00000260653 KIAA2026Q5HYC2 2103 aa18.82■□□□□ 0.6
SIX3-201ENST00000260653 KIR2DS1A0A191URI9 304 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.81■□□□□ 0.6
SIX3-201ENST00000260653 DNASE1P24855 282 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 KIR2DS4P43632 304 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 KIR2DS1Q14954 304 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 ZNF880Q6PDB4 577 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 CLEC18BQ6UXF7 455 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 OR5T2Q8NGG2 359 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 TREM2Q9NZC2 230 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 IGKV1-6A0A0C4DH72 117 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 SRRM5B3KS81 715 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 AADACP22760 399 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 SEC61A1P61619 476 aaKnown RBP18.81■□□□□ 0.6
SIX3-201ENST00000260653 SLC9A3R2Q15599 337 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 NCMAPQ5T1S8 102 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 SHEQ5VZ18 495 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 GCSAMQ8N6F7 178 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 BOLLQ8N9W6 283 aaKnown RBP18.81■□□□□ 0.6
SIX3-201ENST00000260653 PLPPR2Q96GM1 343 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 ESRP2Q9H6T0 727 aaKnown RBP18.81■□□□□ 0.6
SIX3-201ENST00000260653 PRR13Q9NZ81 148 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 OPN4Q9UHM6 478 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 GLS2Q9UI32 602 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 MGAT4AQ9UM21 535 aa18.81■□□□□ 0.6
SIX3-201ENST00000260653 CCSO14618 274 aa18.8■□□□□ 0.6
SIX3-201ENST00000260653 LMO1P25800 156 aa18.8■□□□□ 0.6
SIX3-201ENST00000260653 RAP2BP61225 183 aa18.8■□□□□ 0.6
SIX3-201ENST00000260653 TNFAIP6P98066 277 aaPredicted RBP18.8■□□□□ 0.6
SIX3-201ENST00000260653 DMRTC2Q8IXT2 367 aaPredicted RBP18.8■□□□□ 0.6
SIX3-201ENST00000260653 GRPEL2Q8TAA5 225 aa18.8■□□□□ 0.6
SIX3-201ENST00000260653 CA5BP1Q8WTZ4 195 aa18.8■□□□□ 0.6
SIX3-201ENST00000260653 SHISA9B4DS77 424 aa18.8■□□□□ 0.6
SIX3-201ENST00000260653 SFT2D2O95562 160 aa18.8■□□□□ 0.6
SIX3-201ENST00000260653 ZNF728P0DKX0 622 aa18.8■□□□□ 0.6
SIX3-201ENST00000260653 RPS2P15880 293 aaKnown RBP18.8■□□□□ 0.6
SIX3-201ENST00000260653 LAMTOR1Q6IAA8 161 aa18.8■□□□□ 0.6
SIX3-201ENST00000260653 ZFAND1Q8TCF1 268 aa18.8■□□□□ 0.6
SIX3-201ENST00000260653 MOB3AQ96BX8 217 aa18.8■□□□□ 0.6
SIX3-201ENST00000260653 METRNQ9UJH8 293 aa18.8■□□□□ 0.6
SIX3-201ENST00000260653 SPTBN1Q01082 2364 aaKnown RBP18.8■□□□□ 0.6
SIX3-201ENST00000260653 CTSDP07339 412 aaPredicted RBP18.79■□□□□ 0.6
SIX3-201ENST00000260653 CFHR2P36980 270 aa18.79■□□□□ 0.6
SIX3-201ENST00000260653 KCTD9Q7L273 389 aa18.79■□□□□ 0.6
SIX3-201ENST00000260653 GAPTQ8N292 157 aa18.79■□□□□ 0.6
SIX3-201ENST00000260653 OR10Z1Q8NGY1 313 aa18.79■□□□□ 0.6
SIX3-201ENST00000260653 IL19Q9UHD0 177 aa18.79■□□□□ 0.6
SIX3-201ENST00000260653 ZDHHC8Q9ULC8 765 aa18.79■□□□□ 0.6
SIX3-201ENST00000260653 PPYP01298 95 aa18.79■□□□□ 0.6
SIX3-201ENST00000260653 HLA-DRB3P79483 266 aa18.79■□□□□ 0.6
SIX3-201ENST00000260653 OR5M8Q8NGP6 311 aa18.79■□□□□ 0.6
SIX3-201ENST00000260653 PRR7Q8TB68 274 aa18.79■□□□□ 0.6
SIX3-201ENST00000260653 NEUROG1Q92886 237 aa18.79■□□□□ 0.6
SIX3-201ENST00000260653 IGSF10Q6WRI0 2623 aa18.78■□□□□ 0.6
SIX3-201ENST00000260653 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.78■□□□□ 0.6
SIX3-201ENST00000260653 TK1P04183 234 aa18.78■□□□□ 0.6
SIX3-201ENST00000260653 GATA4P43694 442 aa18.78■□□□□ 0.6
SIX3-201ENST00000260653 RBM14Q96PK6 669 aaKnown RBP18.78■□□□□ 0.6
SIX3-201ENST00000260653 DHRS9Q9BPW9 319 aa18.78■□□□□ 0.6
SIX3-201ENST00000260653 CLEC4MQ9H2X3 399 aaPredicted RBP18.78■□□□□ 0.6
SIX3-201ENST00000260653 NDRG3Q9UGV2 375 aa18.78■□□□□ 0.6
SIX3-201ENST00000260653 HERV-K104P61576 105 aa18.78■□□□□ 0.6
SIX3-201ENST00000260653 IFITM2Q01629 132 aa18.78■□□□□ 0.6
SIX3-201ENST00000260653 COL10A1Q03692 680 aa18.78■□□□□ 0.6
SIX3-201ENST00000260653 C9orf62Q8N4C0 152 aa18.78■□□□□ 0.6
SIX3-201ENST00000260653 GCM1Q9NP62 436 aa18.78■□□□□ 0.6
SIX3-201ENST00000260653 ERRFI1Q9UJM3 462 aaPredicted RBP18.78■□□□□ 0.6
SIX3-201ENST00000260653 TRAPPC2LQ9UL33 140 aa18.78■□□□□ 0.6
SIX3-201ENST00000260653 USP24Q9UPU5 2620 aa18.77■□□□□ 0.6
SIX3-201ENST00000260653 SNRPD2P62316 118 aaKnown RBP18.77■□□□□ 0.6
SIX3-201ENST00000260653 ANKRD55Q3KP44 614 aa18.77■□□□□ 0.6
SIX3-201ENST00000260653 CD177Q8N6Q3 437 aa18.77■□□□□ 0.6
SIX3-201ENST00000260653 RASL12Q9NYN1 266 aa18.77■□□□□ 0.6
SIX3-201ENST00000260653 WIPI2Q9Y4P8 454 aa18.77■□□□□ 0.6
SIX3-201ENST00000260653 HSPB11Q9Y547 144 aa18.77■□□□□ 0.6
SIX3-201ENST00000260653 CFAP46Q8IYW2 2715 aa18.77■□□□□ 0.6
SIX3-201ENST00000260653 IGHV3OR15-7A0A075B7D8 119 aa18.77■□□□□ 0.6
SIX3-201ENST00000260653 H7C1Q1 480 aa18.77■□□□□ 0.6
SIX3-201ENST00000260653 PSG2P11465 335 aa18.77■□□□□ 0.6
SIX3-201ENST00000260653 PIGPP57054 158 aa18.77■□□□□ 0.6
SIX3-201ENST00000260653 ZCCHC24Q8N2G6 241 aaKnown RBP18.77■□□□□ 0.6
SIX3-201ENST00000260653 KIRREL1Q96J84 757 aa18.77■□□□□ 0.6
SIX3-201ENST00000260653 DNAJB11Q9UBS4 358 aa18.77■□□□□ 0.6
SIX3-201ENST00000260653 IGKV1D-17A0A075B6S4 117 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms