RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 GJC3Q8NFK1 279 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 ZNF319Q9P2F9 582 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 RNF150Q9ULK6 438 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 PAM16Q9Y3D7 125 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 IGHV5-10-1A0A0J9YXX1 117 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 BLACEA4D250 179 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 TSPAN2O60636 221 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 IGHV2-70P01814 119 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 TTRP02766 147 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 KITLGP21583 273 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 DYNLT3P51808 116 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 AAED1Q7RTV5 226 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 SMDT1Q9H4I9 107 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 MSL2Q9HCI7 577 aa10.08□□□□□ -0.8
SOX9-201ENST00000245479 A0A1B0GTQ1 180 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 ADAM20O43506 726 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 NTF3P20783 257 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 PAX5Q02548 391 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 WDR25Q64LD2 544 aaPredicted RBP10.07□□□□□ -0.8
SOX9-201ENST00000245479 AGBL5Q8NDL9 886 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 C14orf144Q96I85 54 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 LPAR5Q9H1C0 372 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 ZNF586Q9NXT0 402 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 ANXA10Q9UJ72 324 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 MBPP02686 304 aaPredicted RBP10.07□□□□□ -0.8
SOX9-201ENST00000245479 ANOS1P23352 680 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 ZNF90Q03938 601 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 GFI1BQ5VTD9 330 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 SIGLECL1Q8N7X8 197 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 POC1AQ8NBT0 407 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 ZNF439Q8NDP4 499 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 BORCS7Q96B45 105 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 SPACA9Q96E40 222 aaPredicted RBP10.07□□□□□ -0.8
SOX9-201ENST00000245479 CHST5Q9GZS9 411 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 TMEM100Q9NV29 134 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 NCOA6Q14686 2063 aaPredicted RBP10.07□□□□□ -0.8
SOX9-201ENST00000245479 IGLV1-36A0A0B4J1U3 117 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 MAP1LC3B2A6NCE7 125 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 M0R135 149 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 EFNA2O43921 213 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 FSTP19883 344 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 FOLR3P41439 243 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 STARD6P59095 220 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 SUMO1P63165 101 aaKnown RBP10.07□□□□□ -0.8
SOX9-201ENST00000245479 TMEM267Q0VDI3 215 aaPredicted RBP10.07□□□□□ -0.8
SOX9-201ENST00000245479 C1orf100Q5SVJ3 147 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 LIAT1Q6ZQX7 453 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 MKXQ8IYA7 352 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 OR2T10Q8NGZ9 312 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 GTF3AQ92664 365 aaKnown RBP10.07□□□□□ -0.8
SOX9-201ENST00000245479 MISP3Q96FF7 219 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 ZNF799Q96GE5 643 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 PECRQ9BY49 303 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 HES7Q9BYE0 225 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 MAP1LC3BQ9GZQ8 125 aa10.07□□□□□ -0.8
SOX9-201ENST00000245479 MED13Q9UHV7 2174 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 M0QZK8 103 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 HS3ST1O14792 307 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 GGCTO75223 188 aaKnown RBP10.06□□□□□ -0.8
SOX9-201ENST00000245479 CD5P06127 495 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 ZNF735P0CB33 412 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 CCKARP32238 428 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 APOBEC1P41238 236 aaKnown RBP10.06□□□□□ -0.8
SOX9-201ENST00000245479 MMP16P51512 607 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 RANP62826 216 aaKnown RBP10.06□□□□□ -0.8
SOX9-201ENST00000245479 LINC00114Q6XXX2 140 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 D2HGDHQ8N465 521 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 SPEM1Q8N4L4 309 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 Q8WTZ3 238 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 ABHD3Q8WU67 409 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 WFIKKN1Q96NZ8 548 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 PRSS50Q9UI38 385 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 ST3GAL6Q9Y274 331 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 PCNX2A6NKB5 2137 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 FCGR3AP08637 254 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 HLA-GP17693 338 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 IL2RGP31785 369 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 SSR4P51571 173 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 TPPP2P59282 170 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 PPP1CBP62140 327 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 SMAD4Q13485 552 aaKnown RBP10.06□□□□□ -0.8
SOX9-201ENST00000245479 TMEM183BQ1AE95 376 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 PDLIM3Q53GG5 364 aaPredicted RBP10.06□□□□□ -0.8
SOX9-201ENST00000245479 THEM4Q5T1C6 240 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 FAM58AQ8N1B3 248 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 OR1P1Q8NH06 330 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 PSMF1Q92530 271 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 RDH5Q92781 318 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 TBX15Q96SF7 602 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 HINT2Q9BX68 163 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 DEFB127Q9H1M4 99 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 ZNF581Q9P0T4 197 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 LIPT2A6NK58 231 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 HIST1H2BKO60814 126 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 ABHD16AO95870 558 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 HIST1H2BJP06899 126 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 MELTFP08582 738 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 HIST1H2BOP23527 126 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 HIST1H2BBP33778 126 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 PTGER4P35408 488 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms