RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 OR11L1Q8NGX0 322 aa18.72■□□□□ 0.59
RNF39-201ENST00000244360 GTF3AQ92664 365 aaKnown RBP18.72■□□□□ 0.59
RNF39-201ENST00000244360 LILRA1O75019 489 aa18.72■□□□□ 0.59
RNF39-201ENST00000244360 DIRAS3O95661 229 aa18.72■□□□□ 0.59
RNF39-201ENST00000244360 CDS2O95674 445 aa18.72■□□□□ 0.59
RNF39-201ENST00000244360 ZNF616Q08AN1 781 aa18.72■□□□□ 0.59
RNF39-201ENST00000244360 RNF212Q495C1 297 aa18.72■□□□□ 0.59
RNF39-201ENST00000244360 LFNGQ8NES3 379 aa18.72■□□□□ 0.59
RNF39-201ENST00000244360 GMPPAQ96IJ6 420 aaPredicted RBP18.72■□□□□ 0.59
RNF39-201ENST00000244360 ESRP2Q9H6T0 727 aaKnown RBP18.72■□□□□ 0.59
RNF39-201ENST00000244360 TUBA4BQ9H853 241 aa18.72■□□□□ 0.59
RNF39-201ENST00000244360 C19orf12Q9NSK7 152 aa18.72■□□□□ 0.59
RNF39-201ENST00000244360 COA4Q9NYJ1 87 aa18.72■□□□□ 0.59
RNF39-201ENST00000244360 J3QW42 95 aa18.71■□□□□ 0.59
RNF39-201ENST00000244360 PHF1O43189 567 aaPredicted RBP18.71■□□□□ 0.59
RNF39-201ENST00000244360 GNG3P63215 75 aa18.71■□□□□ 0.59
RNF39-201ENST00000244360 TMPRSS7Q7RTY8 843 aa18.71■□□□□ 0.59
RNF39-201ENST00000244360 ZNF573Q86YE8 665 aa18.71■□□□□ 0.59
RNF39-201ENST00000244360 OR4D5Q8NGN0 318 aa18.71■□□□□ 0.59
RNF39-201ENST00000244360 PBDC1Q9BVG4 233 aa18.71■□□□□ 0.59
RNF39-201ENST00000244360 WFDC1Q9HC57 220 aa18.71■□□□□ 0.59
RNF39-201ENST00000244360 PCP4L1A6NKN8 68 aa18.7■□□□□ 0.58
RNF39-201ENST00000244360 KCNJ3P48549 501 aa18.7■□□□□ 0.58
RNF39-201ENST00000244360 IL24Q13007 206 aa18.7■□□□□ 0.58
RNF39-201ENST00000244360 OR52M1Q8NGK5 317 aa18.7■□□□□ 0.58
RNF39-201ENST00000244360 C12orf57Q99622 126 aa18.7■□□□□ 0.58
RNF39-201ENST00000244360 PKIBQ9C010 78 aa18.7■□□□□ 0.58
RNF39-201ENST00000244360 SPACA1Q9HBV2 294 aa18.7■□□□□ 0.58
RNF39-201ENST00000244360 LHX6Q9UPM6 363 aa18.7■□□□□ 0.58
RNF39-201ENST00000244360 RCL1Q9Y2P8 373 aaKnown RBP18.7■□□□□ 0.58
RNF39-201ENST00000244360 GALR2O43603 387 aaPredicted RBP18.7■□□□□ 0.58
RNF39-201ENST00000244360 BSCL2Q96G97 398 aaPredicted RBP18.7■□□□□ 0.58
RNF39-201ENST00000244360 SPIN2AQ99865 258 aa18.7■□□□□ 0.58
RNF39-201ENST00000244360 SPIN2BQ9BPZ2 258 aa18.7■□□□□ 0.58
RNF39-201ENST00000244360 IGHG3P01860 377 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 PTAFRP25105 342 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 RND3P61587 244 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 C14orf79Q96F83 325 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 ABHD14BQ96IU4 210 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 RPS10P5Q9NQ39 176 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 ZDHHC8Q9ULC8 765 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 TRBV6-6A0A0A6YYG2 114 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 KIR2DS1A0A191URI9 304 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 A0A1B0GW64 132 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 C1orf196B1AJZ1 125 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 MPPED1O15442 326 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 TUSC2O75896 110 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 PRH1P02810 166 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 TK1P04183 234 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 GNRHRP30968 328 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 KIR2DS4P43632 304 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 S100A12P80511 92 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 KIR2DS1Q14954 304 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 HERPUD1Q15011 391 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 SFT2D1Q8WV19 159 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 TP53RKQ96S44 253 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 SCRT1Q9BWW7 348 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 RIMS4Q9H426 269 aaPredicted RBP18.69■□□□□ 0.58
RNF39-201ENST00000244360 SMDT1Q9H4I9 107 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 GLRX2Q9NS18 164 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 CLCF1Q9UBD9 225 aa18.69■□□□□ 0.58
RNF39-201ENST00000244360 C3orf85A0A1B0GTC6 90 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 TRDCB7Z8K6 153 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 MT-ND4LP03901 98 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 ZNF14P17017 642 aaPredicted RBP18.68■□□□□ 0.58
RNF39-201ENST00000244360 LMO1P25800 156 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 PMP22Q01453 160 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 ZNF266Q14584 549 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 SLC35G3Q8N808 338 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 EIF5A2Q9GZV4 153 aaKnown RBP18.68■□□□□ 0.58
RNF39-201ENST00000244360 OR51I2Q9H344 312 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 IFT22Q9H7X7 185 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 ATP23Q9Y6H3 246 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 SCTP09683 121 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 TSC22D1Q15714 1073 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 TBC1D28Q2M2D7 210 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 OR2T2Q6IF00 324 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 CLEC9AQ6UXN8 241 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 BOD1Q96IK1 185 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 CLCC1Q96S66 551 aa18.68■□□□□ 0.58
RNF39-201ENST00000244360 FAM186AA6NE01 2351 aa18.67■□□□□ 0.58
RNF39-201ENST00000244360 DUXBA0A1W2PPF3 345 aa18.67■□□□□ 0.58
RNF39-201ENST00000244360 CTXN2P0C2S0 81 aa18.67■□□□□ 0.58
RNF39-201ENST00000244360 FTH1P19P0C7X4 201 aa18.67■□□□□ 0.58
RNF39-201ENST00000244360 AWAT1Q58HT5 328 aa18.67■□□□□ 0.58
RNF39-201ENST00000244360 VASH2Q86V25 355 aa18.67■□□□□ 0.58
RNF39-201ENST00000244360 SUMF2Q8NBJ7 301 aa18.67■□□□□ 0.58
RNF39-201ENST00000244360 C2CD4CQ8TF44 421 aa18.67■□□□□ 0.58
RNF39-201ENST00000244360 PARP12Q9H0J9 701 aaKnown RBP18.67■□□□□ 0.58
RNF39-201ENST00000244360 TMEM222Q9H0R3 208 aa18.67■□□□□ 0.58
RNF39-201ENST00000244360 ASCL3Q9NQ33 180 aa18.67■□□□□ 0.58
RNF39-201ENST00000244360 J3QT63 122 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 NKX2-8O15522 239 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 MEOX2P50222 304 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 CTAG1AP78358 180 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 EWSR1Q01844 656 aaKnown RBP eCLIP18.66■□□□□ 0.58
RNF39-201ENST00000244360 HABP2Q14520 560 aaPredicted RBP18.66■□□□□ 0.58
RNF39-201ENST00000244360 RHEBQ15382 184 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 OR8G5Q8NG78 346 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 MRPL30Q8TCC3 161 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms