RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 GNRHRP30968 328 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 KCNJ3P48549 501 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 TMPRSS3P57727 454 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 ALKAL2Q6UX46 152 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 OR10J5Q8NHC4 309 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 ST8SIA2Q92186 375 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 MSL2Q9HCI7 577 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 IGKV1-6A0A0C4DH72 117 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 MPPED1O15442 326 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 ZNF250P15622 560 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 GLRXP35754 106 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 UCNP55089 124 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 RAB32Q13637 225 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 SP6Q3SY56 376 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 OR11L1Q8NGX0 322 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 SECTM1Q8WVN6 248 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 KIRREL1Q96J84 757 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 ARPC5LQ9BPX5 153 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 SLC5A7Q9GZV3 580 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 TAAR3PQ9P1P4 343 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 TUBD1Q9UJT1 453 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 SHANK1Q9Y566 2161 aa19.68■□□□□ 0.74
MSX2-201ENST00000239243 IGHV3-64DA0A0J9YX35 117 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 NPIPB11E5RHQ5 1161 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 PHF1O43189 567 aaPredicted RBP19.67■□□□□ 0.74
MSX2-201ENST00000239243 RCC1P18754 421 aaPredicted RBP19.67■□□□□ 0.74
MSX2-201ENST00000239243 LMO1P25800 156 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 ESCO2Q56NI9 601 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 PCSK4Q6UW60 755 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 WDR82Q6UXN9 313 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 GLYATL2Q8WU03 294 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 DNAJB11Q9UBS4 358 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 TRAPPC2LQ9UL33 140 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 C3orf85A0A1B0GTC6 90 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 C1QTNF9BB2RNN3 333 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 C3orf80F5H4A9 247 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 H0YIZ8 118 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 RPS23P62266 143 aaKnown RBP19.67■□□□□ 0.74
MSX2-201ENST00000239243 ALKBH2Q6NS38 261 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 LDLRAD3Q86YD5 345 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 CMTM1Q8IZ96 169 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 PLPPR1Q8TBJ4 325 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 MRPL24Q96A35 216 aaKnown RBP19.67■□□□□ 0.74
MSX2-201ENST00000239243 MSI2Q96DH6 328 aaKnown RBP19.67■□□□□ 0.74
MSX2-201ENST00000239243 ELOVL5Q9NYP7 299 aa19.67■□□□□ 0.74
MSX2-201ENST00000239243 LEUTXA8MZ59 168 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 IGHV3-13P01766 116 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 S100GP29377 79 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 SMCO1Q147U7 214 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 PRAMEF6Q5VXH4 476 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 C18orf12Q96KH6 178 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 ZNF471Q9BX82 626 aaPredicted RBP19.66■□□□□ 0.74
MSX2-201ENST00000239243 OR14J1Q9UGF5 321 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 ZNF835Q9Y2P0 537 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 ANKRD11Q6UB99 2663 aaPredicted RBP19.66■□□□□ 0.74
MSX2-201ENST00000239243 S100A10P60903 97 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 SMIM21Q3B7S5 101 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 BEX5Q5H9J7 111 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 ACP7Q6ZNF0 438 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 ZNF826PQ6ZT77 177 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 PRR7Q8TB68 274 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 PHYHIPLQ96FC7 376 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 ZFP57Q9NU63 452 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 MBNL3Q9NUK0 354 aaKnown RBP19.66■□□□□ 0.74
MSX2-201ENST00000239243 DUSP13Q9UII6 198 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 OR2W1Q9Y3N9 320 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 TMED3Q9Y3Q3 217 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 WIPI2Q9Y4P8 454 aa19.66■□□□□ 0.74
MSX2-201ENST00000239243 ACACAQ13085 2346 aa19.65■□□□□ 0.74
MSX2-201ENST00000239243 CUL9Q8IWT3 2517 aa19.65■□□□□ 0.74
MSX2-201ENST00000239243 RLN2P04090 185 aa19.65■□□□□ 0.74
MSX2-201ENST00000239243 CD200P41217 278 aa19.65■□□□□ 0.74
MSX2-201ENST00000239243 KLF3P57682 345 aaPredicted RBP19.65■□□□□ 0.74
MSX2-201ENST00000239243 NKX6-1P78426 367 aaPredicted RBP19.65■□□□□ 0.74
MSX2-201ENST00000239243 H1FOOQ8IZA3 346 aaPredicted RBP19.65■□□□□ 0.74
MSX2-201ENST00000239243 AQP10Q96PS8 301 aa19.65■□□□□ 0.74
MSX2-201ENST00000239243 A0A0G2JNJ9 132 aa19.64■□□□□ 0.74
MSX2-201ENST00000239243 F5H0A9 414 aaPredicted RBP19.64■□□□□ 0.74
MSX2-201ENST00000239243 FAM27E3Q08E93 113 aa19.64■□□□□ 0.74
MSX2-201ENST00000239243 ZNF818PQ6ZRF7 136 aa19.64■□□□□ 0.74
MSX2-201ENST00000239243 TBC1D26Q86UD7 250 aa19.64■□□□□ 0.74
MSX2-201ENST00000239243 CNTNAP3BQ96NU0 1288 aa19.64■□□□□ 0.74
MSX2-201ENST00000239243 CNTNAP3Q9BZ76 1288 aa19.64■□□□□ 0.74
MSX2-201ENST00000239243 TMEM222Q9H0R3 208 aa19.64■□□□□ 0.74
MSX2-201ENST00000239243 OR5AC2Q9NZP5 309 aa19.64■□□□□ 0.74
MSX2-201ENST00000239243 Q9UFV3 132 aa19.64■□□□□ 0.74
MSX2-201ENST00000239243 SPENQ96T58 3664 aaKnown RBP19.64■□□□□ 0.73
MSX2-201ENST00000239243 HEATR1Q9H583 2144 aaKnown RBP19.64■□□□□ 0.73
MSX2-201ENST00000239243 hCG_1807616A0A1W2PRN6 198 aa19.64■□□□□ 0.73
MSX2-201ENST00000239243 LUMP51884 338 aaPredicted RBP19.64■□□□□ 0.73
MSX2-201ENST00000239243 RBPJQ06330 500 aa19.64■□□□□ 0.73
MSX2-201ENST00000239243 C5orf24Q7Z6I8 188 aa19.64■□□□□ 0.73
MSX2-201ENST00000239243 OR2Z1Q8NG97 314 aa19.64■□□□□ 0.73
MSX2-201ENST00000239243 UFSP2Q9NUQ7 469 aa19.64■□□□□ 0.73
MSX2-201ENST00000239243 IFNL4K9M1U5 179 aa19.63■□□□□ 0.73
MSX2-201ENST00000239243 RRASP10301 218 aa19.63■□□□□ 0.73
MSX2-201ENST00000239243 SSX8Q7RTT4 187 aa19.63■□□□□ 0.73
MSX2-201ENST00000239243 SNRNP40Q96DI7 357 aaKnown RBP19.63■□□□□ 0.73
MSX2-201ENST00000239243 TP53RKQ96S44 253 aa19.63■□□□□ 0.73
MSX2-201ENST00000239243 IGKV1D-13A0A0B4J2D9 117 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms