RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 C1QL4Q86Z23 238 aa12.39□□□□□ -0.43
SFXN3-201ENST00000224807 D2HGDHQ8N465 521 aa12.39□□□□□ -0.43
SFXN3-201ENST00000224807 CCDC71LQ8N9Z2 235 aa12.39□□□□□ -0.43
SFXN3-201ENST00000224807 SIRT7Q9NRC8 400 aa12.39□□□□□ -0.43
SFXN3-201ENST00000224807 KCNS2Q9ULS6 477 aa12.39□□□□□ -0.43
SFXN3-201ENST00000224807 BTNL3Q6UXE8 466 aa12.38□□□□□ -0.43
SFXN3-201ENST00000224807 VASH2Q86V25 355 aa12.38□□□□□ -0.43
SFXN3-201ENST00000224807 POC1BQ8TC44 478 aa12.38□□□□□ -0.43
SFXN3-201ENST00000224807 RBMXL1Q96E39 390 aaKnown RBP12.38□□□□□ -0.43
SFXN3-201ENST00000224807 ZNF488Q96MN9 340 aa12.38□□□□□ -0.43
SFXN3-201ENST00000224807 MOB1AQ9H8S9 216 aa12.38□□□□□ -0.43
SFXN3-201ENST00000224807 THADAQ6YHU6 1953 aa12.38□□□□□ -0.43
SFXN3-201ENST00000224807 IGKV3D-11A0A0A0MRZ8 115 aa12.38□□□□□ -0.43
SFXN3-201ENST00000224807 UBE2L5PA0A1B0GUS4 154 aa12.38□□□□□ -0.43
SFXN3-201ENST00000224807 UBE2G2P60604 165 aa12.38□□□□□ -0.43
SFXN3-201ENST00000224807 ZNF100Q8IYN0 542 aa12.38□□□□□ -0.43
SFXN3-201ENST00000224807 OSR2Q8N2R0 312 aa12.38□□□□□ -0.43
SFXN3-201ENST00000224807 LHX4Q969G2 390 aa12.38□□□□□ -0.43
SFXN3-201ENST00000224807 C18orf12Q96KH6 178 aa12.38□□□□□ -0.43
SFXN3-201ENST00000224807 YPEL4Q96NS1 127 aa12.38□□□□□ -0.43
SFXN3-201ENST00000224807 NUDT16L1Q9BRJ7 211 aaKnown RBP12.38□□□□□ -0.43
SFXN3-201ENST00000224807 FBLN5Q9UBX5 448 aa12.38□□□□□ -0.43
SFXN3-201ENST00000224807 PPP1R3CQ9UQK1 317 aa12.38□□□□□ -0.43
SFXN3-201ENST00000224807 A0A0G2JRQ6 117 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 A0A1W2PNV4 684 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 H7BYZ3 331 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 NRASP01111 189 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 GNB2P62879 340 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 GRB2P62993 217 aaKnown RBP12.37□□□□□ -0.43
SFXN3-201ENST00000224807 TGFBR3Q03167 851 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 OR10A7Q8NGE5 316 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 M1APQ8TC57 530 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 ST8SIA1Q92185 356 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 SDSLQ96GA7 329 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 OR5B12Q96R08 314 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 FREM1Q5H8C1 2179 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 A0A1W2PQD3 144 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 SERPINE2P07093 398 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 ZNF133P52736 654 aaPredicted RBP12.37□□□□□ -0.43
SFXN3-201ENST00000224807 OR4F5Q8NH21 305 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 OR4F4Q96R69 305 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 TMED3Q9Y3Q3 217 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 FER1L5A0AVI2 2057 aa12.37□□□□□ -0.43
SFXN3-201ENST00000224807 PGPEP1LA6NFU8 196 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 TIAF1O95411 115 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 MBP02144 154 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 CRYAAP02489 173 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 TK1P04183 234 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 ARV1Q9H2C2 271 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 EPOPA6NHQ4 379 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 TRDCB7Z8K6 153 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 PAX5Q02548 391 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 PLPPR5Q32ZL2 321 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 KIAA0895LQ68EN5 471 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 SLC25A47Q6Q0C1 308 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 ZDHHC23Q8IYP9 409 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 OR1P1Q8NH06 330 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 GRIFINA4D1Z8 144 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 LRRC3CA6NJW4 275 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 TRAPPC6AO75865 159 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 GALR1P47211 349 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 SLC10A1Q14973 349 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 COL13A1Q5TAT6 717 aaPredicted RBP12.36□□□□□ -0.43
SFXN3-201ENST00000224807 Q6ZPA2 131 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 OR4D5Q8NGN0 318 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 EXTL1Q92935 676 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 SPTSSAQ969W0 71 aa12.36□□□□□ -0.43
SFXN3-201ENST00000224807 ZNF845Q96IR2 970 aaPredicted RBP12.36□□□□□ -0.43
SFXN3-201ENST00000224807 ZNF318Q5VUA4 2279 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 USF3Q68DE3 2245 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 A0A096LPE4 126 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 A0A1W2PPZ6 126 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 A8MWP6 167 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 TNFSF11O14788 317 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 TCN2P20062 427 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 GZMHP20718 246 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 SUCLG1P53597 346 aaKnown RBP12.35□□□□□ -0.43
SFXN3-201ENST00000224807 SPCS3P61009 180 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 SHBQ15464 509 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 RSPO1Q2MKA7 263 aaPredicted RBP12.35□□□□□ -0.43
SFXN3-201ENST00000224807 FAM90A2PQ658T7 463 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 ZNF611Q8N823 705 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 OR13D1Q8NGV5 346 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 SNHG12Q9BXW3 62 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 DEFB126Q9BYW3 111 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 SLC39A9Q9NUM3 307 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 CACNG5Q9UF02 275 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 PITPNC1Q9UKF7 332 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 ELOA3CA0A087WX78 387 aaPredicted RBP12.35□□□□□ -0.43
SFXN3-201ENST00000224807 A0A1B0GX78 115 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 WDR1O75083 606 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 HSPB1P04792 205 aaKnown RBP12.35□□□□□ -0.43
SFXN3-201ENST00000224807 OXGR1Q96P68 337 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 UCK1Q9HA47 277 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 PATZ1Q9HBE1 687 aaKnown RBP12.35□□□□□ -0.43
SFXN3-201ENST00000224807 Q9N2K0 584 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 LYRM2Q9NU23 88 aaPredicted RBP12.35□□□□□ -0.43
SFXN3-201ENST00000224807 PPIAL4AQ9Y536 164 aa12.35□□□□□ -0.43
SFXN3-201ENST00000224807 TPRP12270 2363 aaKnown RBP12.35□□□□□ -0.43
SFXN3-201ENST00000224807 MAP1LC3B2A6NCE7 125 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms