RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 FAHD2BQ6P2I3 314 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-201ENST00000162749 ACP7Q6ZNF0 438 aa16.59■□□□□ 0.25
TNFRSF1A-201ENST00000162749 DMRTC2Q8IXT2 367 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-201ENST00000162749 PRR7Q8TB68 274 aa16.59■□□□□ 0.25
TNFRSF1A-201ENST00000162749 FAHD2AQ96GK7 314 aa16.59■□□□□ 0.25
TNFRSF1A-201ENST00000162749 PLPPR2Q96GM1 343 aa16.59■□□□□ 0.25
TNFRSF1A-201ENST00000162749 MEGF10Q96KG7 1140 aa16.59■□□□□ 0.25
TNFRSF1A-201ENST00000162749 CHMP1AQ9HD42 196 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-201ENST00000162749 SHISA9B4DS77 424 aa16.58■□□□□ 0.25
TNFRSF1A-201ENST00000162749 SIRPB1O00241 398 aa16.58■□□□□ 0.25
TNFRSF1A-201ENST00000162749 RPA2P15927 270 aa16.58■□□□□ 0.25
TNFRSF1A-201ENST00000162749 NPY4RP50391 375 aa16.58■□□□□ 0.25
TNFRSF1A-201ENST00000162749 RBM39Q14498 530 aaKnown RBP16.58■□□□□ 0.25
TNFRSF1A-201ENST00000162749 LPCAT3Q6P1A2 487 aa16.58■□□□□ 0.25
TNFRSF1A-201ENST00000162749 ANGPTL6Q8NI99 470 aa16.58■□□□□ 0.25
TNFRSF1A-201ENST00000162749 KCNJ16Q9NPI9 418 aa16.58■□□□□ 0.25
TNFRSF1A-201ENST00000162749 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1A-201ENST00000162749 OR5H14A6NHG9 310 aa16.58■□□□□ 0.24
TNFRSF1A-201ENST00000162749 AKR1C4P17516 323 aa16.58■□□□□ 0.24
TNFRSF1A-201ENST00000162749 UQCRFS1P47985 274 aa16.58■□□□□ 0.24
TNFRSF1A-201ENST00000162749 ZNF660Q6AZW8 331 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1A-201ENST00000162749 FIP1L1Q6UN15 594 aaKnown RBP16.58■□□□□ 0.24
TNFRSF1A-201ENST00000162749 Q6ZS49 121 aa16.58■□□□□ 0.24
TNFRSF1A-201ENST00000162749 LRRC29Q8WV35 223 aa16.58■□□□□ 0.24
TNFRSF1A-201ENST00000162749 SEC22AQ96IW7 307 aa16.58■□□□□ 0.24
TNFRSF1A-201ENST00000162749 MFFQ9GZY8 342 aa16.58■□□□□ 0.24
TNFRSF1A-201ENST00000162749 NECAP2Q9NVZ3 263 aa16.58■□□□□ 0.24
TNFRSF1A-201ENST00000162749 OR14J1Q9UGF5 321 aa16.58■□□□□ 0.24
TNFRSF1A-201ENST00000162749 SH2D1BO14796 132 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 RP2O75695 350 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 HAND1O96004 215 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 IGHV1-46P01743 117 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 OR5H8P0DN80 308 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 CEBPDP49716 269 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 RAB14P61106 215 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 TFF3Q07654 80 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 PAN3Q58A45 887 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 TOR2AQ5JU69 321 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 C20orf204Q6ZNR8 217 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 COMMD7Q86VX2 200 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 ITLN1Q8WWA0 313 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 LRRC46Q96FV0 321 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 LIME1Q9H400 295 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 Q9N2K0 584 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 ZDHHC8Q9ULC8 765 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 MYO18BQ8IUG5 2567 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 RRASP10301 218 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 GATA4P43694 442 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 SRSF7Q16629 238 aaKnown RBP eCLIP16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 SMIM21Q3B7S5 101 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 PEG10Q86TG7 708 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 MRPL30Q8TCC3 161 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 IL19Q9UHD0 177 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 GPR132Q9UNW8 380 aa16.57■□□□□ 0.24
TNFRSF1A-201ENST00000162749 DCHS2Q6V1P9 2916 aa16.56■□□□□ 0.24
TNFRSF1A-201ENST00000162749 SRRM5B3KS81 715 aa16.56■□□□□ 0.24
TNFRSF1A-201ENST00000162749 VAMP1P23763 118 aa16.56■□□□□ 0.24
TNFRSF1A-201ENST00000162749 CFHR2P36980 270 aa16.56■□□□□ 0.24
TNFRSF1A-201ENST00000162749 GSG1LQ6UXU4 331 aa16.56■□□□□ 0.24
TNFRSF1A-201ENST00000162749 MOGAT3Q86VF5 341 aa16.56■□□□□ 0.24
TNFRSF1A-201ENST00000162749 CASTOR1Q8WTX7 329 aa16.56■□□□□ 0.24
TNFRSF1A-201ENST00000162749 ZNF2Q9BSG1 426 aaPredicted RBP16.56■□□□□ 0.24
TNFRSF1A-201ENST00000162749 RIMS4Q9H426 269 aaPredicted RBP16.56■□□□□ 0.24
TNFRSF1A-201ENST00000162749 C5orf66Q9H5L9 145 aa16.56■□□□□ 0.24
TNFRSF1A-201ENST00000162749 SPTAN1Q13813 2472 aaKnown RBP16.56■□□□□ 0.24
TNFRSF1A-201ENST00000162749 TUBAL3A6NHL2 446 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 B3GALNT1O75752 331 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 ZNF205O95201 554 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 EGR1P18146 543 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 BAMBIQ13145 260 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 ALKAL2Q6UX46 152 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 ZNF546Q86UE3 836 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 GCSAMQ8N6F7 178 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 OR10Z1Q8NGY1 313 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 TMEM230Q96A57 120 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 PHB2Q99623 299 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 ARPC5LQ9BPX5 153 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 TREM2Q9NZC2 230 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 KIF25Q9UIL4 384 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 DUS4LO95620 317 aaKnown RBP16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 GNLYP22749 145 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 FPR2P25090 351 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 LMO1P25800 156 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 AP2S1P53680 142 aaPredicted RBP16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 TNFAIP6P98066 277 aaPredicted RBP16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 SHEQ5VZ18 495 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 TMEM65Q6PI78 240 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 DHRS11Q6UWP2 260 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 NEUROG1Q92886 237 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 PDCD10Q9BUL8 212 aa16.55■□□□□ 0.24
TNFRSF1A-201ENST00000162749 TRBV6-6A0A0A6YYG2 114 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 LOC105371267A0A1B0GV96 52 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 DBX1A6NMT0 343 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 E7EQL1 145 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 SIAH2O43255 324 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 PSPNO60542 156 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 KNG1P01042 644 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 MDH2P40926 338 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 FGL1Q08830 312 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms