RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 GMFBP60983 142 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 FAM189A2Q15884 450 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 DHRS7BQ6IAN0 325 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-222ENST00000641587 ZNF826PQ6ZT77 177 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 BTN2A1Q7KYR7 527 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 VMO1Q7Z5L0 202 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 C11orf44Q8N8P7 122 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 OR5H6Q8NGV6 325 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 OR10K1Q8NGX5 313 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 FAM46BQ96A09 425 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 CST11Q9H112 138 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 OR51I2Q9H344 312 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 C16orf95Q9H693 158 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 FN3KRPQ9HA64 309 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 C1orf123Q9NWV4 160 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 RNF7Q9UBF6 113 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 ADAM30Q9UKF2 790 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 POLDIP2Q9Y2S7 368 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 SIGLEC9Q9Y336 463 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 ETV7Q9Y603 341 aa8.21□□□□□ -1.1
PHGDH-222ENST00000641587 NBEAL2Q6ZNJ1 2754 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 A0A075B6Q4 140 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 TMEM272A0A1B0GTI8 110 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 OOEPA6NGQ2 149 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 CTDSP2O14595 271 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 CDIPTO14735 213 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 MPIG6BO95866 241 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 LIPFP07098 398 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 BCL3P20749 454 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 BMXP51813 675 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 SNU13P55769 128 aaKnown RBP8.2□□□□□ -1.1
PHGDH-222ENST00000641587 IL24Q13007 206 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 KLRD1Q13241 179 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 DYNC1I2Q13409 638 aaKnown RBP8.2□□□□□ -1.1
PHGDH-222ENST00000641587 GPR176Q14439 515 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 C2orf76Q3KRA6 126 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 UBE2NLQ5JXB2 153 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 SAMD5Q5TGI4 173 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 CD276Q5ZPR3 534 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 OR10K2Q6IF99 312 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 CRIP3Q6Q6R5 217 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 LYPD6Q86Y78 171 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 FAM90A1Q86YD7 464 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 LAX1Q8IWV1 398 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 SAXO1Q8IYX7 474 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 PNKDQ8N490 385 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 CELF2-AS1Q8N7Q2 184 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 KCNG3Q8TAE7 436 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 LRRC29Q8WV35 223 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 ST8SIA4Q92187 359 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 AQP3Q92482 292 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 ZNF488Q96MN9 340 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 TMEM59Q9BXS4 323 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 PKIBQ9C010 78 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 NXF2Q9GZY0 626 aaKnown RBP8.2□□□□□ -1.1
PHGDH-222ENST00000641587 BANF2Q9H503 90 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 SIRT7Q9NRC8 400 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 PCDHB16Q9NRJ7 776 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 ZNRD1Q9P1U0 126 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 GHRLQ9UBU3 117 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 VPREB3Q9UKI3 123 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 SPATA2Q9UM82 520 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 PEX16Q9Y5Y5 336 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 A3GALT2U3KPV4 340 aa8.2□□□□□ -1.1
PHGDH-222ENST00000641587 IGKV1-12A0A0C4DH73 117 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 A0A1W2PP11 408 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 DVL1O14640 695 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 ZNF780AO75290 641 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-222ENST00000641587 RHBDL1O75783 438 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 TSPAN9O75954 239 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 NXPH2O95156 264 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 IGKV1D-12P01611 117 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 EIF4EP06730 217 aaKnown RBP8.19□□□□□ -1.1
PHGDH-222ENST00000641587 VSIG8P0DPA2 414 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 CD37P11049 281 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 MGMTP16455 207 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 PRKACAP17612 351 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 MPZP25189 248 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 TALDO1P37837 337 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 SCAND1P57086 179 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 MADCAM1Q13477 382 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 KPRPQ5T749 579 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-222ENST00000641587 OR2W3Q7Z3T1 314 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 GCSAMQ8N6F7 178 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 PXT1Q8NFP0 134 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 EMG1Q92979 244 aaKnown RBP8.19□□□□□ -1.1
PHGDH-222ENST00000641587 ERGIC1Q969X5 290 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 PHF21AQ96BD5 680 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 SEH1LQ96EE3 360 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 SELENOIQ9C0D9 397 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 ATG5Q9H1Y0 275 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 DPAGT1Q9H3H5 408 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 RBFOX1Q9NWB1 397 aaKnown RBP8.19□□□□□ -1.1
PHGDH-222ENST00000641587 RHBDL2Q9NX52 303 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 ONECUT1Q9UBC0 465 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 RPUSD1Q9UJJ7 312 aaKnown RBP8.19□□□□□ -1.1
PHGDH-222ENST00000641587 RAB22AQ9UL26 194 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 FAM96BQ9Y3D0 163 aa8.19□□□□□ -1.1
PHGDH-222ENST00000641587 NOTCH3Q9UM47 2321 aa8.18□□□□□ -1.1
PHGDH-222ENST00000641587 TRAV38-1A0A0B4J264 116 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms