RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 DHFRP00374 187 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 KNG1P01042 644 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 CD55P08174 381 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 FCGR3AP08637 254 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 EGR1P18146 543 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 DNASE1P24855 282 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 CFHR2P36980 270 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 TAS2R46P59540 309 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 HOXA4Q00056 320 aaPredicted RBP11.02□□□□□ -0.65
PHGDH-221ENST00000641573 RBM39Q14498 530 aaKnown RBP11.02□□□□□ -0.65
PHGDH-221ENST00000641573 CARTPTQ16568 116 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 MST1LQ2TV78 715 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 SMIM21Q3B7S5 101 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 CHRFAM7AQ494W8 412 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 ZNF672Q499Z4 452 aaPredicted RBP11.02□□□□□ -0.65
PHGDH-221ENST00000641573 VAX1Q5SQQ9 334 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 Q71RC1 249 aaPredicted RBP11.02□□□□□ -0.65
PHGDH-221ENST00000641573 BOLLQ8N9W6 283 aaKnown RBP11.02□□□□□ -0.65
PHGDH-221ENST00000641573 GINS4Q9BRT9 223 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 DYNLRB1Q9NP97 96 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 ETAA1Q9NY74 926 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 OR14J1Q9UGF5 321 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 SCP2D1Q9UJQ7 156 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 FLVCR2Q9UPI3 526 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 CADP27708 2225 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 ZNF469Q96JG9 3925 aaPredicted RBP11.02□□□□□ -0.65
PHGDH-221ENST00000641573 SRRM5B3KS81 715 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 SLC33A1O00400 549 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-221ENST00000641573 ARPC1BO15143 372 aaKnown RBP11.01□□□□□ -0.65
PHGDH-221ENST00000641573 IFNA6P05013 189 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 RBMXP38159 391 aaKnown RBP11.01□□□□□ -0.65
PHGDH-221ENST00000641573 OR3A3P47888 321 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 CEBPDP49716 269 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-221ENST00000641573 RAG2P55895 527 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 ZMYND11Q15326 602 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 RBMS2Q15434 407 aaKnown RBP11.01□□□□□ -0.65
PHGDH-221ENST00000641573 TATDN3Q17R31 274 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 SCGB2B2Q4G0G5 96 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 PAN3Q58A45 887 aaKnown RBP11.01□□□□□ -0.65
PHGDH-221ENST00000641573 AGAP6Q5VW22 663 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 IDO2Q6ZQW0 420 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 GCSAMQ8N6F7 178 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 OR11L1Q8NGX0 322 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 FAM222BQ8WU58 562 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 ERGIC1Q969X5 290 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 MDFIQ99750 246 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 PRRT1Q99946 306 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 ZNF286AQ9HBT8 521 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 GCM1Q9NP62 436 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 SLC2A8Q9NY64 477 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 RNF7Q9UBF6 113 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 ALG5Q9Y673 324 aa11.01□□□□□ -0.65
PHGDH-221ENST00000641573 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11□□□□□ -0.65
PHGDH-221ENST00000641573 NAPSAO96009 420 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 LHBP01229 141 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 TNFRSF1AP19438 455 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 MDH2P40926 338 aaKnown RBP11□□□□□ -0.65
PHGDH-221ENST00000641573 ARPC4P59998 168 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 CCL8P80075 99 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 CDK10Q15131 360 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 FAM209AQ5JX71 171 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 SHEQ5VZ18 495 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 Q6ZPA2 131 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 FAM90A1Q86YD7 464 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 ZCCHC24Q8N2G6 241 aaKnown RBP11□□□□□ -0.65
PHGDH-221ENST00000641573 OR5AP2Q8NGF4 316 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 OR13C8Q8NGS7 320 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 SPATA3Q8NHX4 192 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 Q8TCH9 128 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 EGLN1Q9GZT9 426 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 PPA2Q9H2U2 334 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 MS4A5Q9H3V2 200 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 RIMS4Q9H426 269 aaPredicted RBP11□□□□□ -0.65
PHGDH-221ENST00000641573 EHFQ9NZC4 300 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 ANXA10Q9UJ72 324 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 WIPI2Q9Y4P8 454 aa11□□□□□ -0.65
PHGDH-221ENST00000641573 RFPL4AA6NLU0 287 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 RFPL4AL1F8VTS6 287 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 IFNL4K9M1U5 179 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 SDCBPO00560 298 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-221ENST00000641573 PEX14O75381 377 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 TFF1P04155 84 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 LMO1P25800 156 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 CD80P33681 288 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 TSPAN5P62079 268 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 SRSF7Q16629 238 aaKnown RBP eCLIP10.99□□□□□ -0.65
PHGDH-221ENST00000641573 SWI5Q1ZZU3 235 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 CLEC9AQ6UXN8 241 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 MUC15Q8N387 334 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 ARRDC1Q8N5I2 433 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 PLPPR1Q8TBJ4 325 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 MRPL30Q8TCC3 161 aaKnown RBP10.99□□□□□ -0.65
PHGDH-221ENST00000641573 CHAC2Q8WUX2 184 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 C18orf12Q96KH6 178 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 SLC25A21Q9BQT8 299 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-221ENST00000641573 BEX2Q9BXY8 128 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 BEX1Q9HBH7 125 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 Q9N2K0 584 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 DECR2Q9NUI1 292 aa10.99□□□□□ -0.65
PHGDH-221ENST00000641573 TREM2Q9NZC2 230 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms