RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 TRNP1Q6NT89 227 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 DHRS11Q6UWP2 260 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 TMEM91Q6ZNR0 172 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 CLEC20AQ6ZU45 233 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 PAQR9Q6ZVX9 377 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 SSX8Q7RTT4 187 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 ZNF695Q8IW36 515 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 C10orf126Q8N4M7 172 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 WDR31Q8NA23 367 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 STARD4Q96DR4 205 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 GPR82Q96P67 336 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 MMP26Q9NRE1 261 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 RLIMQ9NVW2 624 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 NTMQ9P121 344 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 VAX2Q9UIW0 290 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 SNX11Q9Y5W9 270 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 UBIAD1Q9Y5Z9 338 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 A0A1W2PRD5 423 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 ODAMA1E959 279 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 FAM90A18PA6NE21 464 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 FAM90A16PA6NEW6 464 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 FAM90A9PA6NNJ1 464 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 FAM90A5PA8MXJ8 464 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 UMAD1C9J7I0 102 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 MFNGO00587 321 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 TAAR5O14804 337 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 PAGE4O60829 102 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 TNFSF13O75888 250 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 STC2O76061 302 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 H1F0P07305 194 aaKnown RBP3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 FAM90A15PP0C7V4 464 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 FAM90A14PP0C7W9 464 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 LIMS3P0CW19 117 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 LIMS4P0CW20 117 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 HOXB2P14652 356 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 FAHP16930 419 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 MPZP25189 248 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 MPGP29372 298 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 GDF5P43026 501 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 ZNF133P52736 654 aaPredicted RBP3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 EFNA5P52803 228 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 DVL1P1P54792 670 aaPredicted RBP3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 BTG2P78543 158 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 OC90Q02509 493 aaPredicted RBP3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 RING1Q06587 406 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 ATXN7L3Q14CW9 347 aaPredicted RBP3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 KIAA0040Q15053 153 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 TGIF1Q15583 401 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 ELAVL1Q15717 326 aaKnown RBP3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 TBC1D28Q2M2D7 210 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 SPANXN4Q5MJ08 99 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 NIPAL3Q6P499 406 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 OPN5Q6U736 354 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 MRPL55Q7Z7F7 128 aaKnown RBP3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 C17orf64Q86WR6 236 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 TGIF2LYQ8IUE0 185 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 ZDHHC22Q8N966 263 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 SUMF2Q8NBJ7 301 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 OR51T1Q8NGJ9 327 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 OR2I1PQ8NGU4 316 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 GATAD1Q8WUU5 269 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 TSPAN32Q96QS1 320 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 MYADMQ96S97 322 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 ATOH8Q96SQ7 321 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 OR2H1Q9GZK4 316 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 NRSN2Q9GZP1 204 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 NPFFR1Q9GZQ6 430 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 IKZF5Q9H5V7 419 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 ZNF442Q9H7R0 627 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 SPANXB1Q9NS25 103 aaPredicted RBP3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 SLC25A37Q9NYZ2 338 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 PIPOXQ9P0Z9 390 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 FZD1Q9UP38 647 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 BOD1L1Q8NFC6 3051 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 ZNF638Q14966 1978 aaKnown RBP3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 ARID2Q68CP9 1835 aa3.41□□□□□ -1.86
R3HDM1-220ENST00000628915 KBTBD11-OT1A0A1B0GTJ5 212 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 PRR19A6NJB7 356 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 TEX22C9J3V5 150 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 ISLRO14498 428 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 GSTZ1O43708 216 aaPredicted RBP3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 WISP3O95389 354 aaPredicted RBP3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 CA1P00915 261 aaPredicted RBP3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 HBZP02008 142 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 HPXP02790 462 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 FAUP35544 74 aaKnown RBP3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 P2RY1P47900 373 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 WNT3P56703 355 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 RPL38P63173 70 aaKnown RBP3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 IZUMO4Q1ZYL8 232 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 RAB6CQ53S08 254 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 MEIG1Q5JSS6 88 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 LYSMD4Q5XG99 296 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 TMEM215Q68D42 235 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 ALKAL1Q6UXT8 129 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 MSRB3Q8IXL7 192 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 UBALD2Q8IYN6 164 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 GPR135Q8IZ08 494 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 FAM213BQ8TBF2 198 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms