RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 FAAP20Q6NZ36 180 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 IL17RELQ6ZVW7 336 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 SLC36A1Q7Z2H8 476 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 ADGRG3Q86Y34 549 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 OR51A4Q8NGJ6 313 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 SLC25A43Q8WUT9 341 aaPredicted RBP10.01□□□□□ -0.81
LINC00538-201ENST00000626109 TNFAIP8L1Q8WVP5 186 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 SLC25A21Q9BQT8 299 aaPredicted RBP10.01□□□□□ -0.81
LINC00538-201ENST00000626109 SDHAF2Q9NX18 166 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 ZNF107Q9UII5 783 aaPredicted RBP10.01□□□□□ -0.81
LINC00538-201ENST00000626109 GJE1A6NN92 205 aa10□□□□□ -0.81
LINC00538-201ENST00000626109 F5H5P2 479 aa10□□□□□ -0.81
LINC00538-201ENST00000626109 M0QZK8 103 aa10□□□□□ -0.81
LINC00538-201ENST00000626109 FSTP19883 344 aa10□□□□□ -0.81
LINC00538-201ENST00000626109 FKBP2P26885 142 aaKnown RBP10□□□□□ -0.81
LINC00538-201ENST00000626109 HTR2CP28335 458 aa10□□□□□ -0.81
LINC00538-201ENST00000626109 S100A11P31949 105 aa10□□□□□ -0.81
LINC00538-201ENST00000626109 STEAP1BQ6NZ63 245 aa10□□□□□ -0.81
LINC00538-201ENST00000626109 RNF144BQ7Z419 303 aa10□□□□□ -0.81
LINC00538-201ENST00000626109 TMEM229BQ8NBD8 167 aa10□□□□□ -0.81
LINC00538-201ENST00000626109 OR10AC1Q8NH08 325 aa10□□□□□ -0.81
LINC00538-201ENST00000626109 FOXB1Q99853 325 aa10□□□□□ -0.81
LINC00538-201ENST00000626109 TMEM138Q9NPI0 162 aa10□□□□□ -0.81
LINC00538-201ENST00000626109 HEATR5AQ86XA9 2040 aa10□□□□□ -0.81
LINC00538-201ENST00000626109 A0A1B0GW55 424 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 CIB4A0PJX0 185 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 SLC22A23A1A5C7 686 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 NKX6-3A6NJ46 265 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 PLPP3O14495 311 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 NPIPB7O75200 414 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 WISP1O95388 367 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 PMS2P2O95744 297 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 DUX4L2P0CJ85 424 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 DUX4L3P0CJ86 424 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 DUX4L4P0CJ87 422 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 DUX4L5P0CJ88 424 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 DUX4L6P0CJ89 424 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 DUX4L7P0CJ90 424 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 OTX1P32242 354 aaPredicted RBP9.99□□□□□ -0.81
LINC00538-201ENST00000626109 RPS27P42677 84 aaKnown RBP9.99□□□□□ -0.81
LINC00538-201ENST00000626109 BAMBIQ13145 260 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 NHLRC3Q5JS37 347 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 TMEM225Q6GV28 225 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 FAHD2BQ6P2I3 314 aaPredicted RBP9.99□□□□□ -0.81
LINC00538-201ENST00000626109 FAM214BQ7L5A3 538 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 LRRC18Q8N456 261 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 OR2AK2Q8NG84 335 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 OR51S1Q8NGJ8 323 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 OR6M1Q8NGM8 313 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 OR52N5Q8NH56 324 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 PTX4Q96A99 478 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 DDIT4LQ96D03 193 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 FAHD2AQ96GK7 314 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 FAM210BQ96KR6 192 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 HIST1H2AAQ96QV6 131 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 PTDSS2Q9BVG9 487 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 CSTL1Q9H114 145 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 CA10Q9NS85 328 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 MED9Q9NWA0 146 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 ZNF224Q9NZL3 707 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 DUX4Q9UBX2 424 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 HHLA2Q9UM44 414 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 R4GMQ9 66 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 IGLV1-36A0A0B4J1U3 117 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 TMEM272A0A1B0GTI8 110 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 A0A1B0GV72 72 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 USP17L23D6RBM5 183 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 WNT11O96014 354 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 CFDP00746 253 aaPredicted RBP9.99□□□□□ -0.81
LINC00538-201ENST00000626109 NBEAP1P0C6P0 100 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 VSIG10L2P0DP72 767 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 PRF1P14222 555 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 CXCL2P19875 107 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 SFTPDP35247 375 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 DAP3P51398 398 aaKnown RBP9.99□□□□□ -0.81
LINC00538-201ENST00000626109 PTTG1IPP53801 180 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 HNF4GQ14541 408 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 PRR30Q53SZ7 412 aaPredicted RBP9.99□□□□□ -0.81
LINC00538-201ENST00000626109 SERTAD4-AS1Q5TG53 156 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 SAMD5Q5TGI4 173 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 TMEM244Q5VVB8 128 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 ZNF324BQ6AW86 544 aaPredicted RBP9.99□□□□□ -0.81
LINC00538-201ENST00000626109 FAM166AQ6J272 317 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 CCDC54Q8NEL0 328 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 MBD3L2Q8NHZ7 208 aaPredicted RBP9.99□□□□□ -0.81
LINC00538-201ENST00000626109 RBPMSQ93062 196 aaKnown RBP9.99□□□□□ -0.81
LINC00538-201ENST00000626109 AMELYQ99218 206 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 RNF2Q99496 336 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 RSG1Q9BU20 258 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 AP5S1Q9NUS5 200 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 ASF1BQ9NVP2 202 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 PLEKHJ1Q9NW61 149 aa9.99□□□□□ -0.81
LINC00538-201ENST00000626109 NCKAP5O14513 1909 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 LAMA5O15230 3695 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 C17orf100A8MU93 164 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 EFNA2O43921 213 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 AQP8O94778 261 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 GPANK1O95872 356 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 CYB5AP00167 134 aa9.98□□□□□ -0.81
LINC00538-201ENST00000626109 CD3DP04234 171 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms