RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 HDHD3Q9BSH5 251 aaPredicted RBP14.88□□□□□ -0.03
PTCHD3-202ENST00000622555 MARVELD1Q9BSK0 173 aa14.88□□□□□ -0.03
PTCHD3-202ENST00000622555 ZNF665Q9H7R5 613 aa14.88□□□□□ -0.03
PTCHD3-202ENST00000622555 ZNF701Q9NV72 531 aaPredicted RBP14.88□□□□□ -0.03
PTCHD3-202ENST00000622555 ABCA12Q86UK0 2595 aa14.88□□□□□ -0.03
PTCHD3-202ENST00000622555 CELSR2Q9HCU4 2923 aa14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 HMX3A6NHT5 357 aa14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 IGHV2-70P01814 119 aa14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 SLC6A1P30531 599 aa14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 TMEM33P57088 247 aa14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 ATXN7L3Q14CW9 347 aaPredicted RBP14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 ZNF788Q6ZQV5 615 aa14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 C17orf107Q6ZR85 190 aa14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 ZNF561Q8N587 486 aa14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 ZNF525Q8N782 197 aa14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 ZNRF1Q8ND25 227 aa14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 OR4S1Q8NGB4 309 aa14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 TMEM246Q9BRR3 403 aa14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 BARX1Q9HBU1 254 aaPredicted RBP14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 ING3Q9NXR8 418 aa14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 KLK11Q9UBX7 282 aa14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 MAB21L2Q9Y586 359 aa14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 TACC2O95359 2948 aa14.87□□□□□ -0.03
PTCHD3-202ENST00000622555 A0A0B4J293 547 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 TMPRSS2O15393 492 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 ZNF737O75373 536 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 RBBP9O75884 186 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 FCER2P06734 321 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 OR3A1P47881 315 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 INPP1P49441 399 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 PLA1AQ53H76 456 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 ATPAF1Q5TC12 328 aaPredicted RBP14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 ZNF57Q68EA5 555 aaPredicted RBP14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 PLET1Q6UQ28 207 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 DNM1P46Q6ZS02 220 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 FAM216BQ8N7L0 139 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 PPP1R35Q8TAP8 253 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 PERPQ96FX8 193 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 SNX22Q96L94 193 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 DNTTIP1Q9H147 329 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 CHMP1AQ9HD42 196 aaPredicted RBP14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 IFT46Q9NQC8 304 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 EDARQ9UNE0 448 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 FAM240BA0A1B0GVZ2 78 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 A0A1B0GW55 424 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 SIGLEC5O15389 551 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 ORC5O43913 435 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 FSTL3O95633 263 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 DUX4L2P0CJ85 424 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 DUX4L3P0CJ86 424 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 DUX4L4P0CJ87 422 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 DUX4L5P0CJ88 424 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 DUX4L6P0CJ89 424 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 DUX4L7P0CJ90 424 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 SELLP14151 372 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 HLA-DMAP28067 261 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 BTCP35070 178 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 GDNFP39905 211 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 EIF2B2P49770 351 aaKnown RBP14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 IL13RA1P78552 427 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 GRK1Q15835 563 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 SHEQ5VZ18 495 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 DUX4L9Q6RFH8 374 aaPredicted RBP14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 MUC20Q8N307 709 aaPredicted RBP14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 TMEM185AQ8NFB2 350 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 OR6F1Q8NGZ6 308 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 PLPPR1Q8TBJ4 325 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 C12orf4Q9NQ89 552 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 DUX4Q9UBX2 424 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 MTFP1Q9UDX5 166 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 FBN2P35556 2912 aa14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 ANKRD17O75179 2603 aaKnown RBP14.86□□□□□ -0.03
PTCHD3-202ENST00000622555 ADAM20O43506 726 aa14.85□□□□□ -0.03
PTCHD3-202ENST00000622555 NDUFA2O43678 99 aa14.85□□□□□ -0.03
PTCHD3-202ENST00000622555 CBX5P45973 191 aa14.85□□□□□ -0.03
PTCHD3-202ENST00000622555 GPR6P46095 362 aaPredicted RBP14.85□□□□□ -0.03
PTCHD3-202ENST00000622555 KCNJ3P48549 501 aa14.85□□□□□ -0.03
PTCHD3-202ENST00000622555 PDLIM4P50479 330 aa14.85□□□□□ -0.03
PTCHD3-202ENST00000622555 LYPD2Q6UXB3 125 aa14.85□□□□□ -0.03
PTCHD3-202ENST00000622555 SLC36A1Q7Z2H8 476 aa14.85□□□□□ -0.03
PTCHD3-202ENST00000622555 MED30Q96HR3 178 aa14.85□□□□□ -0.03
PTCHD3-202ENST00000622555 C7orf50Q9BRJ6 194 aaKnown RBP14.85□□□□□ -0.03
PTCHD3-202ENST00000622555 SHARPINQ9H0F6 387 aa14.85□□□□□ -0.03
PTCHD3-202ENST00000622555 RBMX2Q9Y388 322 aaKnown RBP14.85□□□□□ -0.03
PTCHD3-202ENST00000622555 K7N7A8 449 aa14.84□□□□□ -0.03
PTCHD3-202ENST00000622555 TNFRSF13BO14836 293 aaPredicted RBP14.84□□□□□ -0.03
PTCHD3-202ENST00000622555 TK1P04183 234 aa14.84□□□□□ -0.03
PTCHD3-202ENST00000622555 PAX1P15863 534 aa14.84□□□□□ -0.03
PTCHD3-202ENST00000622555 ACTBP60709 375 aa14.84□□□□□ -0.03
PTCHD3-202ENST00000622555 ACTG1P63261 375 aa14.84□□□□□ -0.03
PTCHD3-202ENST00000622555 GLCCI1Q86VQ1 547 aa14.84□□□□□ -0.03
PTCHD3-202ENST00000622555 GVQW1Q8N7I0 195 aa14.84□□□□□ -0.03
PTCHD3-202ENST00000622555 OCSTAMPQ9BR26 566 aa14.84□□□□□ -0.03
PTCHD3-202ENST00000622555 ST6GALNAC5Q9BVH7 336 aa14.84□□□□□ -0.03
PTCHD3-202ENST00000622555 GSX2Q9BZM3 304 aa14.84□□□□□ -0.03
PTCHD3-202ENST00000622555 ZNF230Q9UIE0 474 aaPredicted RBP14.84□□□□□ -0.03
PTCHD3-202ENST00000622555 POLQO75417 2590 aa14.84□□□□□ -0.03
PTCHD3-202ENST00000622555 KIAA2026Q5HYC2 2103 aa14.84□□□□□ -0.03
PTCHD3-202ENST00000622555 CCNKO75909 580 aa14.83□□□□□ -0.03
PTCHD3-202ENST00000622555 NAPSAO96009 420 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms