RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 VCANP13611 3396 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 A0A0J9YY10 115 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 WIPF3A6NGB9 483 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 SERINC4A6NH21 518 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 C17orf51A8MQB3 221 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 IFNL4K9M1U5 179 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 CDIPTO14735 213 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 VAMP5O95183 116 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 CLPSP04118 112 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 IGLC2P0DOY2 106 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 IGLC3P0DOY3 106 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 BCL2P10415 239 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 ATP6V0CP27449 155 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 NTSR1P30989 418 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 ERVS71-1P61550 626 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 SNAI3Q3KNW1 292 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 SLC22A6Q4U2R8 563 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 WDR38Q5JTN6 314 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 WDR25Q64LD2 544 aaPredicted RBP6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 ASPHD2Q6ICH7 369 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 KCNIP4Q6PIL6 250 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 Q6ZN92 141 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 PNKDQ8N490 385 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 KLHDC1Q8N7A1 406 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 BCORP1Q8N888 145 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 ZFP62Q8NB50 900 aaPredicted RBP6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 OR4S2Q8NH73 311 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 DYRK2Q92630 601 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 DNAJA3Q96EY1 480 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 ZNF48Q96MX3 618 aaPredicted RBP6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 AMELYQ99218 206 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 ULBP3Q9BZM4 244 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 OR51I2Q9H344 312 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 HRASLS2Q9NWW9 162 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 MRPS18BQ9Y676 258 aaKnown RBP6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 CACNA1CQ13936 2221 aa6.53□□□□□ -1.36
TRIM49B-202ENST00000622138 A0A1W2PRS3 328 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 MED19A0JLT2 244 aaPredicted RBP6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 ZNF814B7Z6K7 855 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 RAMP3O60896 148 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 WISP1O95388 367 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 DDAH2O95865 285 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 SCGB1D2O95969 90 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 IFI6P09912 130 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 SFTPDP35247 375 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 PTGER4P35408 488 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 COMPP49747 757 aaPredicted RBP6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 SUMO1P63165 101 aaKnown RBP6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 HYAL1Q12794 435 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 CNN3Q15417 329 aaKnown RBP6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 VAMP3Q15836 100 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 TDRG1Q3Y452 100 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 SPATA45Q537H7 98 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 C1orf174Q8IYL3 243 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 SLC22A18ASQ8N1D0 253 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 METTL27Q8N6F8 245 aaPredicted RBP6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 CHST4Q8NCG5 386 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 OR5H2Q8NGV7 314 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 OR2T10Q8NGZ9 312 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 C16orf52Q8NHV5 167 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 ZNF519Q8TB69 540 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 SLC37A2Q8TED4 501 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 ELSPBP1Q96BH3 223 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 SLAMF6Q96DU3 332 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 RASL10BQ96S79 203 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 GPX7Q96SL4 187 aaPredicted RBP6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 CCDC3Q9BQI4 270 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 WDR76Q9H967 626 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 TAS2R4Q9NYW5 299 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 FBLN5Q9UBX5 448 aa6.52□□□□□ -1.36
TRIM49B-202ENST00000622138 CORTO00230 105 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 HYPMO75409 117 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 TRAPPC6AO75865 159 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 STAG3L3P0CL85 134 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 TNFRSF4P43489 277 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 BIDP55957 195 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 RPL15P61313 204 aaKnown RBP6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 EWSR1Q01844 656 aaKnown RBP eCLIP6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 EGR4Q05215 589 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 SHBQ15464 509 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 ZNF74Q16587 644 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 Q5PR19 223 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 CBLN3Q6UW01 205 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 ATG4DQ86TL0 474 aaPredicted RBP6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 NIT1Q86X76 327 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 ZNF709Q8N972 641 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 OR13H1Q8NG92 308 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 OR13G1Q8NGZ3 307 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 VN1R17PQ8TDU5 208 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 FOXN4Q96NZ1 517 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 TSPAN32Q96QS1 320 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 LPAR5Q9H1C0 372 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 MEGF9Q9H1U4 602 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 SRA1Q9HD15 236 aaKnown RBP6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 EHFQ9NZC4 300 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 CGGBP1Q9UFW8 167 aaPredicted RBP6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 RCL1Q9Y2P8 373 aaKnown RBP6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 PPIAL4AQ9Y536 164 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 EYSQ5T1H1 3165 aa6.52□□□□□ -1.37
TRIM49B-202ENST00000622138 IGHV2-26A0A0B4J1V2 119 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 380.8 ms