RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	TMEM123	Q8N131	208 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	TMEM54	Q969K7	222 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	CEP192	Q8TEP8	1941 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	ELOA3C	A0A087WX78	387 aa	Predicted RBP	12.51	□□□□□ -0.41
SMTN-223	ENST00000619644		A0A0G2JMM0	328 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644		A0A1W2PPB8	328 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644		A0A1W2PRS3	328 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	KIR3DP1	A8MWS1	328 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	CST7	O76096	145 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	EPHA8	P29322	1005 aa	Predicted RBP	12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	RPS18	P62269	152 aa	Known RBP	12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	C10orf128	Q5T292	105 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	LIAT1	Q6ZQX7	453 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	ZIC4	Q8N9L1	334 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	DNASE2B	Q8WZ79	361 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	SPSB1	Q96BD6	273 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	MISP3	Q96FF7	219 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	ABHD14A	Q9BUJ0	271 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	SUCNR1	Q9BXA5	334 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	KNTC1	P50748	2209 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644		A0A087WWC5	75 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	ZNF724	A8MTY0	619 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	HSD17B6	O14756	317 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	CTSS	P25774	331 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	GNRHR	P30968	328 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	NTF4	P34130	210 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	ALDH3B1	P43353	468 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	NPBWR2	P48146	333 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	LYSMD4	Q5XG99	296 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	ZNF695	Q8IW36	515 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	FGFBP3	Q8TAT2	258 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	TP53RK	Q96S44	253 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	DUSP23	Q9BVJ7	150 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	SMDT1	Q9H4I9	107 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	UNKL	Q9H9P5	680 aa	Known RBP	12.5	□□□□□ -0.41
SMTN-223	ENST00000619644		A0A096LPE4	126 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644		A0A1W2PPZ6	126 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	NKX2-6	A6NCS4	301 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	PTBP3	O95758	552 aa	Known RBP	12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	TCN2	P20062	427 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	VAMP2	P63027	116 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	WIPI1	Q5MNZ9	446 aa	Predicted RBP	12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	DNLZ	Q5SXM8	178 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	GPR157	Q5UAW9	335 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	FAM27B	Q5VT28	67 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	ZNF385C	Q66K41	422 aa	Predicted RBP	12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	SPEM1	Q8N4L4	309 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	OR2G3	Q8NGZ4	309 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	OR51B6	Q9H340	312 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	UBE2Z	Q9H832	354 aa	Predicted RBP	12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	ZDBF2	Q9HCK1	2354 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	DIDO1	Q9BTC0	2240 aa	Known RBP	12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	FREM1	Q5H8C1	2179 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	TOX3	O15405	576 aa	Predicted RBP	12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	TRGC1	P0CF51	173 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	RND3	P61587	244 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	RAB35	Q15286	201 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	HLA-B	Q31612	363 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	HIST2H3PS2	Q5TEC6	136 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	ZNF429	Q86V71	674 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	IFI44	Q8TCB0	444 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	LURAP1	Q96LR2	239 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	PCED1A	Q9H1Q7	454 aa		12.5	□□□□□ -0.41
SMTN-223	ENST00000619644	JMJD7	P0C870	316 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	EPHA1	P21709	976 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	SPCS3	P61009	180 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	PSG4	Q00888	419 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	CALHM1	Q8IU99	346 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	LIPG	Q9Y5X9	500 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	COL6A3	P12111	3177 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	C3orf80	F5H4A9	247 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	IGLV3-1	P01715	115 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644		P04436	131 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	SRP19	P09132	144 aa	Known RBP	12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	FKBP2	P26885	142 aa	Known RBP	12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	MRPS34	P82930	218 aa	Known RBP	12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	SLC25A24	Q6NUK1	477 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	BEND4	Q6ZU67	534 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	LHFPL2	Q6ZUX7	228 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	ZNF611	Q8N823	705 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	RNF138	Q8WVD3	245 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	FRZB	Q92765	325 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	PACRG	Q96M98	296 aa	Predicted RBP	12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	FOXB1	Q99853	325 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	C2orf88	Q9BSF0	95 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	DNAJC13	O75165	2243 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	IGHV1-45	A0A0A0MS14	117 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644		H3BP45	60 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	ATXN7	O15265	892 aa	Predicted RBP	12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	RAC1	P63000	192 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	MRPL14	Q6P1L8	145 aa	Known RBP	12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	SPSB3	Q6PJ21	355 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	CYB561D1	Q8N8Q1	229 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	CCDC71L	Q8N9Z2	235 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	ABHD5	Q8WTS1	349 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	ABHD3	Q8WU67	409 aa		12.49	□□□□□ -0.41
SMTN-223	ENST00000619644	MUC3A	Q02505	3323 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644		A0A087WZY1	265 aa		12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	RRP8	O43159	456 aa	Known RBP	12.48	□□□□□ -0.41
SMTN-223	ENST00000619644	UMOD	P07911	640 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms