RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ABCD4O14678 606 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 OR2H2O95918 312 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 ERP29P30040 261 aaKnown RBP6.59□□□□□ -1.35
NEK3-207ENST00000617054 TAS2R46P59540 309 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 SUPT4H1P63272 117 aaKnown RBP6.59□□□□□ -1.35
NEK3-207ENST00000617054 ELP2Q6IA86 826 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 ADAM5Q6NVV9 412 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 CLEC18BQ6UXF7 455 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 UNQ6494/PRO21346Q6UXR6 183 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 C9orf62Q8N4C0 152 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 PCNPQ8WW12 178 aaKnown RBP6.59□□□□□ -1.35
NEK3-207ENST00000617054 ZCCHC14Q8WYQ9 949 aaKnown RBP6.59□□□□□ -1.35
NEK3-207ENST00000617054 FAM210AQ96ND0 272 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 DPCDQ9BVM2 203 aaPredicted RBP6.59□□□□□ -1.35
NEK3-207ENST00000617054 MRPL37Q9BZE1 423 aaKnown RBP6.59□□□□□ -1.35
NEK3-207ENST00000617054 PCDHB16Q9NRJ7 776 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 ZNF835Q9Y2P0 537 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 AMDHD2Q9Y303 409 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 IGHV3OR15-7A0A075B7D8 119 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 LRP5LA4QPB2 252 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 NKX2-6A6NCS4 301 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 FAM90A27PA6NNH2 459 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 PSPNO60542 156 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 THBDP07204 575 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 CD40P25942 277 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 SORDQ00796 357 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 LYG2Q86SG7 212 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 LHFPL1Q86WI0 220 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 ARRDC1Q8N5I2 433 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 Q8NFD4 153 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 PLPPR1Q8TBJ4 325 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 NEUROG1Q92886 237 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 WFIKKN1Q96NZ8 548 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 PTBP3O95758 552 aaKnown RBP6.58□□□□□ -1.36
NEK3-207ENST00000617054 MPZP25189 248 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 ZNF81P51508 661 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 BSPH1Q075Z2 132 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 HERPUD1Q15011 391 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 ANKRD55Q3KP44 614 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 ZNF660Q6AZW8 331 aaPredicted RBP6.58□□□□□ -1.36
NEK3-207ENST00000617054 WDR82Q6UXN9 313 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 CLRN3Q8NCR9 226 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 LINC01560Q8TB33 94 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 ZFAND1Q8TCF1 268 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 TMEM171Q8WVE6 324 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 RND1Q92730 232 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 HYLS1Q96M11 299 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 PDCD10Q9BUL8 212 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 ALX4Q9H161 411 aaPredicted RBP6.58□□□□□ -1.36
NEK3-207ENST00000617054 ESRP2Q9H6T0 727 aaKnown RBP6.58□□□□□ -1.36
NEK3-207ENST00000617054 C1orf123Q9NWV4 160 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 OPN4Q9UHM6 478 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 FXYD6-FXYD2A0A087WZ82 144 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 TRBV23-1A0A0A0MS06 115 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 IGKV1-6A0A0C4DH72 117 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 MED19A0JLT2 244 aaPredicted RBP6.58□□□□□ -1.36
NEK3-207ENST00000617054 DPRXA6NFQ7 191 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 RFPL4AA6NLU0 287 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 RFPL4AL1F8VTS6 287 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 H3BUI4 141 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 HOXB5P09067 269 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 PGA5P0DJD9 388 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 TBPP20226 339 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 AADACP22760 399 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 UCNP55089 124 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 EIF2S3LQ2VIR3 472 aaKnown RBP6.58□□□□□ -1.36
NEK3-207ENST00000617054 PAN3Q58A45 887 aaKnown RBP6.58□□□□□ -1.36
NEK3-207ENST00000617054 BEX5Q5H9J7 111 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 Q6P435 159 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 SAXO1Q8IYX7 474 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 SPICQ8N5J4 248 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 ZDHHC22Q8N966 263 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 ELMOD3Q96FG2 381 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 BOD1Q96IK1 185 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 OR2V2Q96R30 315 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 FXYD6Q9H0Q3 95 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 ZNF286AQ9HBT8 521 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 NECAP2Q9NVZ3 263 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 DCAF16Q9NXF7 216 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 TAAR3PQ9P1P4 343 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 ZFHX3Q15911 3703 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 C5orf51A6NDU8 294 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 SLC33A1O00400 549 aaPredicted RBP6.58□□□□□ -1.36
NEK3-207ENST00000617054 CCL21O00585 134 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 ARPC5O15511 151 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 TNFSF12O43508 249 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 EGR1P18146 543 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 ERVK11-1P61568 191 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 AESQ08117 197 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 ARL6IP1Q15041 203 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 TMEM128Q5BJH2 165 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 MRGPRGQ86SM5 289 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 NRIP2Q9BQI9 281 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 RANBP3Q9H6Z4 567 aaPredicted RBP6.58□□□□□ -1.36
NEK3-207ENST00000617054 NPTNQ9Y639 398 aa6.58□□□□□ -1.36
NEK3-207ENST00000617054 OR2A4O95047 310 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 CXCL2P19875 107 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 KITLGP21583 273 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 DTYMKP23919 212 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 PIGPP57054 158 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms