RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 C9orf50Q5SZB4 431 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 A0A1B0GTH9 108 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 C20orf27Q9GZN8 174 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 TRAV8-7A0A075B6U6 113 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 C9JCJ5 164 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 FGF17O60258 216 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 HAND1O96004 215 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 ZNF774Q6NX45 483 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 ASCL4Q6XD76 172 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 RPS4Y2Q8TD47 263 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 ZNF384Q8TF68 577 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 GALNT14Q96FL9 552 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 LINC01587Q99440 93 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 TNFSF10P50591 281 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 TDGF1P3P51864 188 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 CCL8P80075 99 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 RSPO4Q2I0M5 234 aaPredicted RBP11.21□□□□□ -0.62
TCF4-248ENST00000616053 FAM159AQ6UWV7 190 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 STHQ8IWL8 128 aa11.21□□□□□ -0.62
TCF4-248ENST00000616053 CD33P20138 364 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 TCL1AP56279 114 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 TTC32Q5I0X7 151 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 OTUD1Q5VV17 481 aaPredicted RBP11.2□□□□□ -0.62
TCF4-248ENST00000616053 PCSK4Q6UW60 755 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 TMEM37Q8WXS4 190 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 GPR82Q96P67 336 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 AHCTF1Q8WYP5 2266 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 PHLPP1O60346 1717 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 DIP2CQ9Y2E4 1556 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 TMEM229AB2RXF0 380 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 CD37P11049 281 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 FZD5Q13467 585 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 ZNF789Q5FWF6 425 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 OR2T10Q8NGZ9 312 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 LPAR5Q9H1C0 372 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 C19orf53Q9UNZ5 99 aaPredicted RBP11.2□□□□□ -0.62
TCF4-248ENST00000616053 F8WEM9 126 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 GABRG2P18507 467 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 PSG6Q00889 435 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 RFLNAQ6ZTI6 216 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 SPSB1Q96BD6 273 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 NIT2Q9NQR4 276 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 C10orf128Q5T292 105 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 OR1L8Q8NGR8 309 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 YIPF6Q96EC8 236 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 TMEM189A5PLL7 270 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 ZNF32P17041 273 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 PSMB6P28072 239 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 ZNF66Q6ZN08 573 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 OR1L6Q8NGR2 347 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 DNASE2BQ8WZ79 361 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 IGKV6D-41A0A0C4DH26 115 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 PRR19A6NJB7 356 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 EMX1Q04741 257 aaPredicted RBP11.2□□□□□ -0.62
TCF4-248ENST00000616053 OTPQ5XKR4 325 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 RAB33BQ9H082 229 aa11.2□□□□□ -0.62
TCF4-248ENST00000616053 LILRA5A6NI73 299 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 TCRBP04435 133 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 PET117Q6UWS5 81 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 FGF14Q92915 247 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 PTP4A1Q93096 173 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 PAXXQ9BUH6 204 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 HOXD4P09016 255 aaPredicted RBP11.19□□□□□ -0.62
TCF4-248ENST00000616053 CLRN3Q8NCR9 226 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 C2CD4CQ8TF44 421 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 CACNG5Q9UF02 275 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 TRIP12Q14669 1992 aaPredicted RBP11.19□□□□□ -0.62
TCF4-248ENST00000616053 GAGE10A6NGK3 116 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 ISG15P05161 165 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 SUCLG1P53597 346 aaKnown RBP11.19□□□□□ -0.62
TCF4-248ENST00000616053 SNRPNP63162 240 aaKnown RBP11.19□□□□□ -0.62
TCF4-248ENST00000616053 PRSS53Q2L4Q9 553 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 NSUN5P2Q63ZY6 315 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 MARVELD3Q96A59 401 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 SDF2Q99470 211 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 PRNDQ9UKY0 176 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 CNTFRP26992 372 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 KIAA2026Q5HYC2 2103 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 C2orf50Q96LR7 162 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 AKIP1Q9NQ31 210 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 PXDNQ92626 1479 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 GJB3O75712 270 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 SLC25A53Q5H9E4 307 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 MRGPREQ86SM8 312 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 C20orf196Q8IYI0 205 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 OR52I1Q8NGK6 324 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 SYT11Q9BT88 431 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 PEMTQ9UBM1 199 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 MYO7BQ6PIF6 2116 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 PROB1E7EW31 1015 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 OPRL1P41146 370 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 ANKRD37Q7Z713 158 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 MS4A6EQ96DS6 147 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 EP300Q09472 2414 aaPredicted RBP11.19□□□□□ -0.62
TCF4-248ENST00000616053 TIAL1Q01085 375 aaKnown RBP eCLIP11.19□□□□□ -0.62
TCF4-248ENST00000616053 C2orf83Q53S99 150 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 KHDC3LQ587J8 217 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 FAM78BQ5VT40 261 aa11.19□□□□□ -0.62
TCF4-248ENST00000616053 MRPL30Q8TCC3 161 aaKnown RBP11.19□□□□□ -0.62
TCF4-248ENST00000616053 NIPSNAP1Q9BPW8 284 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms