RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 SLC26A1Q9H2B4 701 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 DYNLRB1Q9NP97 96 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 LIN7CQ9NUP9 197 aaKnown RBP12.11□□□□□ -0.47
MUC1-223ENST00000611571 CDIPTO14735 213 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 KLK2P20151 261 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 COX5AP20674 150 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 G0S2P27469 103 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 EPHA8P29322 1005 aaPredicted RBP12.11□□□□□ -0.47
MUC1-223ENST00000611571 OR3A1P47881 315 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 RAC3P60763 192 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 EWSR1Q01844 656 aaKnown RBP eCLIP12.11□□□□□ -0.47
MUC1-223ENST00000611571 ENDOGQ14249 297 aaKnown RBP12.11□□□□□ -0.47
MUC1-223ENST00000611571 PRR27Q6MZM9 219 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 MRGPRFQ96AM1 343 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 GALMQ96C23 342 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 ACTR3CQ9C0K3 210 aaPredicted RBP12.11□□□□□ -0.47
MUC1-223ENST00000611571 RIMS4Q9H426 269 aaPredicted RBP12.11□□□□□ -0.47
MUC1-223ENST00000611571 G6PC2Q9NQR9 355 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 B3GAT1Q9P2W7 334 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 PSG11Q9UQ72 335 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 TNFSF15O95150 251 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
MUC1-223ENST00000611571 CXorf66Q5JRM2 361 aaPredicted RBP12.11□□□□□ -0.47
MUC1-223ENST00000611571 OR10AD1Q8NGE0 317 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 KCNE4Q8WWG9 221 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 TXN2Q99757 166 aa12.11□□□□□ -0.47
MUC1-223ENST00000611571 RYDENQ9NUL5 291 aaKnown RBP12.11□□□□□ -0.47
MUC1-223ENST00000611571 SLC22A20A6NK97 555 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 TIAF1O95411 115 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 BCL3P20749 454 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 UNC119Q13432 240 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 TPRX1Q8N7U7 411 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 MRGPRDQ8TDS7 321 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 C22orf15Q8WYQ4 148 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 GFI1Q99684 422 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 HEATR1Q9H583 2144 aaKnown RBP12.1□□□□□ -0.47
MUC1-223ENST00000611571 LRP5LA4QPB2 252 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 CLDN34H7C241 214 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 FGF2P09038 288 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 SNRPCP09234 159 aaKnown RBP12.1□□□□□ -0.47
MUC1-223ENST00000611571 ARR3P36575 388 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 DLK1P80370 383 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 DHODHQ02127 395 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 ZNF345Q14585 488 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 TMEM178AQ8NBL3 297 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 CHST5Q9GZS9 411 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 LOC105371267A0A1B0GV96 52 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 H3BQ15 152 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 AP4M1O00189 453 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 CD1AP06126 327 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 NOVA1P51513 510 aaKnown RBP12.1□□□□□ -0.47
MUC1-223ENST00000611571 MSI2Q96DH6 328 aaKnown RBP12.1□□□□□ -0.47
MUC1-223ENST00000611571 KCNMB2Q9Y691 235 aa12.1□□□□□ -0.47
MUC1-223ENST00000611571 IGHV5-10-1A0A0J9YXX1 117 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 M0R1X1 148 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 FCGR3BO75015 233 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 PGA3P0DJD8 388 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 LSM6P62312 80 aaKnown RBP12.09□□□□□ -0.47
MUC1-223ENST00000611571 SLC38A11Q08AI6 406 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 UBE2V2Q15819 145 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 SNAI3Q3KNW1 292 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 C1orf100Q5SVJ3 147 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 SKA3Q8IX90 412 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 RBMXL3Q8N7X1 1067 aaKnown RBP12.09□□□□□ -0.47
MUC1-223ENST00000611571 DAZAP1Q96EP5 407 aaKnown RBP12.09□□□□□ -0.47
MUC1-223ENST00000611571 TREM2Q9NZC2 230 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 RALGAPA2Q2PPJ7 1873 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 MMP7P09237 267 aaPredicted RBP12.09□□□□□ -0.47
MUC1-223ENST00000611571 CTRB1P17538 263 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 TNFSF4P23510 183 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 PPP1CCP36873 323 aaKnown RBP12.09□□□□□ -0.47
MUC1-223ENST00000611571 IL13RA2Q14627 380 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 Q3ZCU0 254 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 FFAR4Q5NUL3 377 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 CTRB2Q6GPI1 263 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 SMRP1Q8NCR6 262 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 TRBV23-1A0A0A0MS06 115 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 NPIPB9F8W1W9 429 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 G3V3Q6 166 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 ACTL6AO96019 429 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 ARL3P36405 182 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 ZNF92Q03936 586 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 SH3BGRL3Q9H299 93 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 ZDHHC11Q9H8X9 412 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 TCF20Q9UGU0 1960 aaKnown RBP12.09□□□□□ -0.47
MUC1-223ENST00000611571 PTPRDP23468 1912 aa12.09□□□□□ -0.47
MUC1-223ENST00000611571 C3orf80F5H4A9 247 aa12.08□□□□□ -0.47
MUC1-223ENST00000611571 TOX4O94842 621 aa12.08□□□□□ -0.47
MUC1-223ENST00000611571 MBPP02686 304 aaPredicted RBP12.08□□□□□ -0.47
MUC1-223ENST00000611571 FBP1P09467 338 aa12.08□□□□□ -0.47
MUC1-223ENST00000611571 HLA-DRB3P79483 266 aa12.08□□□□□ -0.47
MUC1-223ENST00000611571 ZNF519Q8TB69 540 aa12.08□□□□□ -0.47
MUC1-223ENST00000611571 IP6K3Q96PC2 410 aa12.08□□□□□ -0.47
MUC1-223ENST00000611571 OR2D2Q9H210 308 aa12.08□□□□□ -0.47
MUC1-223ENST00000611571 FAM206AQ9NX38 181 aa12.08□□□□□ -0.47
MUC1-223ENST00000611571 SCTP09683 121 aa12.08□□□□□ -0.48
MUC1-223ENST00000611571 OR5G3P0C626 314 aa12.08□□□□□ -0.48
MUC1-223ENST00000611571 VDAC1P21796 283 aa12.08□□□□□ -0.48
MUC1-223ENST00000611571 C15orf54Q8N8G6 183 aa12.08□□□□□ -0.48
MUC1-223ENST00000611571 CYB561D1Q8N8Q1 229 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms