RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 ZNF133P52736 654 aaPredicted RBP8.35□□□□□ -1.07
TPM1-233ENST00000610733 PLPPR5Q32ZL2 321 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 DEGS2Q6QHC5 323 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 GCNT2Q8N0V5 402 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 ZNF383Q8NA42 475 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 LHX4Q969G2 390 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 MVB12AQ96EY5 273 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 FOXB1Q99853 325 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 ZPBPQ9BS86 351 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 SLC25A22Q9H936 323 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 OBP2BQ9NPH6 170 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 GAR1Q9NY12 217 aaKnown RBP8.35□□□□□ -1.07
TPM1-233ENST00000610733 C3orf85A0A1B0GTC6 90 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 A0A1B0GTI1 187 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 H3BQ15 152 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 TRGC2P03986 189 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 CD1AP06126 327 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 RPS2P15880 293 aaKnown RBP8.35□□□□□ -1.07
TPM1-233ENST00000610733 SCAND1P57086 179 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 DLK1P80370 383 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 ZNF468Q5VIY5 522 aaPredicted RBP8.35□□□□□ -1.07
TPM1-233ENST00000610733 OR1F12Q8NHA8 337 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 DEFB127Q9H1M4 99 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 PATZ1Q9HBE1 687 aaKnown RBP8.35□□□□□ -1.07
TPM1-233ENST00000610733 CLDN16Q9Y5I7 305 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 DMRT1Q9Y5R6 373 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 MTCH2Q9Y6C9 303 aa8.35□□□□□ -1.07
TPM1-233ENST00000610733 TGIF2-C20orf24A0A0A6YYL0 155 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 IGHV3-43A0A0B4J1X8 118 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 HSPB2A8KAH6 182 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 TMEM14DPA8MWL7 114 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 DVL1O14640 695 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 IGHV3-43DP0DP04 118 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 IL2RGP31785 369 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 SUPT4H1P63272 117 aaKnown RBP8.34□□□□□ -1.07
TPM1-233ENST00000610733 CCL20P78556 96 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 HSPB2Q16082 182 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 AARDQ4LEZ3 155 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 PHYHD1Q5SRE7 291 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 SAPCD1Q5SSQ6 148 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 NSUN5P2Q63ZY6 315 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 ZNF787Q6DD87 383 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 TPRX1Q8N7U7 411 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 NBEAQ8NFP9 2946 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 RHBDD1Q8TEB9 315 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 ZNF501Q96CX3 271 aaPredicted RBP8.34□□□□□ -1.07
TPM1-233ENST00000610733 PLEKHA2Q9HB19 425 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 TUBG2Q9NRH3 451 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 A0A0J9YW62 118 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 WIPF3A6NGB9 483 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 FIGNL2A6NMB9 653 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 TRAF3IP2O43734 574 aaPredicted RBP8.34□□□□□ -1.07
TPM1-233ENST00000610733 NXPH2O95156 264 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 PGA4P0DJD7 388 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 PGA3P0DJD8 388 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 COX5BP10606 129 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 CA6P23280 308 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 EWSR1Q01844 656 aaKnown RBP eCLIP8.34□□□□□ -1.07
TPM1-233ENST00000610733 CFHR1Q03591 330 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 ZNF92Q03936 586 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 ACER2Q5QJU3 275 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 ABHD17BQ5VST6 288 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 OR4F5Q8NH21 305 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 OR10J5Q8NHC4 309 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 RNF166Q96A37 237 aaPredicted RBP8.34□□□□□ -1.07
TPM1-233ENST00000610733 OR4F4Q96R69 305 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 SMIM7Q9BQ49 75 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 PLXNA2O75051 1894 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 FRMPD3Q5JV73 1810 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 CXorf65A6NEN9 183 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 ANKRD30BLA7E2S9 258 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 FSTP19883 344 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 CHRNA7P36544 502 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 GNG10P50151 68 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 OR10AD1Q8NGE0 317 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 MOB1AQ9H8S9 216 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 CACNG5Q9UF02 275 aa8.34□□□□□ -1.07
TPM1-233ENST00000610733 PPYP01298 95 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 IGHV2-70P01814 119 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 HOXC4P09017 264 aaPredicted RBP8.33□□□□□ -1.08
TPM1-233ENST00000610733 IGFBP3P17936 291 aaPredicted RBP8.33□□□□□ -1.08
TPM1-233ENST00000610733 EGR1P18146 543 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 GABRA2P47869 451 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 DHODHQ02127 395 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 TLE4Q04727 773 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 AGBL5Q8NDL9 886 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 OR10V1Q8NGI7 309 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 PP6455Q8WZ26 134 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 RAB39BQ96DA2 213 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 ZNF665Q9H7R5 613 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 RBFOX3A6NFN3 312 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 DEFA4P12838 97 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 BCL3P20749 454 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 HOXC12P31275 282 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 NXPH1P58417 271 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 PNLIPRP3Q17RR3 467 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 LBHQ53QV2 105 aaPredicted RBP8.33□□□□□ -1.08
TPM1-233ENST00000610733 FNDC7Q5VTL7 733 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 WDR5BQ86VZ2 330 aa8.33□□□□□ -1.08
TPM1-233ENST00000610733 ADAMTS17Q8TE56 1095 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms