RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 GCM1Q9NP62 436 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 GPR132Q9UNW8 380 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 ROS1P08922 2347 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 USP24Q9UPU5 2620 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 M0R233 179 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 SIAH2O43255 324 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 CD55P08174 381 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 ZNF660Q6AZW8 331 aaPredicted RBP18.16■□□□□ 0.5
USP6NL-204ENST00000606752 OR52B4Q8NGK2 314 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 ITLN2Q8WWU7 325 aaPredicted RBP18.16■□□□□ 0.5
USP6NL-204ENST00000606752 ZNF2Q9BSG1 426 aaPredicted RBP18.16■□□□□ 0.5
USP6NL-204ENST00000606752 KIR2DS1A0A191URI9 304 aa18.15■□□□□ 0.5
USP6NL-204ENST00000606752 OR5H14A6NHG9 310 aa18.15■□□□□ 0.5
USP6NL-204ENST00000606752 TRDCB7Z8K6 153 aa18.15■□□□□ 0.5
USP6NL-204ENST00000606752 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.15■□□□□ 0.5
USP6NL-204ENST00000606752 SULT1A3P0DMM9 295 aa18.15■□□□□ 0.5
USP6NL-204ENST00000606752 SULT1A4P0DMN0 295 aa18.15■□□□□ 0.5
USP6NL-204ENST00000606752 EGR1P18146 543 aa18.15■□□□□ 0.5
USP6NL-204ENST00000606752 FPR2P25090 351 aa18.15■□□□□ 0.5
USP6NL-204ENST00000606752 KIR2DS4P43632 304 aa18.15■□□□□ 0.5
USP6NL-204ENST00000606752 CEBPDP49716 269 aaPredicted RBP18.15■□□□□ 0.5
USP6NL-204ENST00000606752 KIR2DS1Q14954 304 aa18.15■□□□□ 0.5
USP6NL-204ENST00000606752 ZNF880Q6PDB4 577 aa18.15■□□□□ 0.5
USP6NL-204ENST00000606752 ZNF497Q6ZNH5 498 aa18.15■□□□□ 0.5
USP6NL-204ENST00000606752 C20orf204Q6ZNR8 217 aa18.15■□□□□ 0.5
USP6NL-204ENST00000606752 C17orf107Q6ZR85 190 aa18.15■□□□□ 0.5
USP6NL-204ENST00000606752 OR11H7Q8NGC8 314 aa18.15■□□□□ 0.5
USP6NL-204ENST00000606752 SEBOXQ9HB31 216 aaPredicted RBP18.15■□□□□ 0.5
USP6NL-204ENST00000606752 NPTNQ9Y639 398 aa18.15■□□□□ 0.5
USP6NL-204ENST00000606752 CHD3Q12873 2000 aaKnown RBP18.15■□□□□ 0.5
USP6NL-204ENST00000606752 PSPNO60542 156 aa18.14■□□□□ 0.5
USP6NL-204ENST00000606752 PLAUP00749 431 aa18.14■□□□□ 0.5
USP6NL-204ENST00000606752 ECI1P42126 302 aa18.14■□□□□ 0.5
USP6NL-204ENST00000606752 EIF2B2P49770 351 aaKnown RBP18.14■□□□□ 0.5
USP6NL-204ENST00000606752 SURF2Q15527 256 aaPredicted RBP18.14■□□□□ 0.5
USP6NL-204ENST00000606752 EFNB3Q15768 340 aa18.14■□□□□ 0.5
USP6NL-204ENST00000606752 FAHD2BQ6P2I3 314 aaPredicted RBP18.14■□□□□ 0.5
USP6NL-204ENST00000606752 PEG10Q86TG7 708 aaKnown RBP18.14■□□□□ 0.5
USP6NL-204ENST00000606752 GAPTQ8N292 157 aa18.14■□□□□ 0.5
USP6NL-204ENST00000606752 PLPPR1Q8TBJ4 325 aa18.14■□□□□ 0.5
USP6NL-204ENST00000606752 Q8TCH9 128 aa18.14■□□□□ 0.5
USP6NL-204ENST00000606752 ZNF431Q8TF32 576 aaPredicted RBP18.14■□□□□ 0.5
USP6NL-204ENST00000606752 FAHD2AQ96GK7 314 aa18.14■□□□□ 0.5
USP6NL-204ENST00000606752 FYTTD1Q96QD9 318 aaKnown RBP18.14■□□□□ 0.5
USP6NL-204ENST00000606752 RNF7Q9UBF6 113 aa18.14■□□□□ 0.5
USP6NL-204ENST00000606752 WIPI2Q9Y4P8 454 aa18.14■□□□□ 0.5
USP6NL-204ENST00000606752 ANKHD1Q8IWZ3 2542 aaKnown RBP18.14■□□□□ 0.49
USP6NL-204ENST00000606752 DEFB108AA8MXU0 73 aa18.14■□□□□ 0.49
USP6NL-204ENST00000606752 TNFRSF1AP19438 455 aa18.14■□□□□ 0.49
USP6NL-204ENST00000606752 RBMXP38159 391 aaKnown RBP18.14■□□□□ 0.49
USP6NL-204ENST00000606752 FAM209AQ5JX71 171 aa18.14■□□□□ 0.49
USP6NL-204ENST00000606752 MUC20Q8N307 709 aaPredicted RBP18.14■□□□□ 0.49
USP6NL-204ENST00000606752 BOLLQ8N9W6 283 aaKnown RBP18.14■□□□□ 0.49
USP6NL-204ENST00000606752 DECR2Q9NUI1 292 aa18.14■□□□□ 0.49
USP6NL-204ENST00000606752 CISD1Q9NZ45 108 aaKnown RBP18.14■□□□□ 0.49
USP6NL-204ENST00000606752 DNAJB11Q9UBS4 358 aa18.14■□□□□ 0.49
USP6NL-204ENST00000606752 FABP7O15540 132 aa18.13■□□□□ 0.49
USP6NL-204ENST00000606752 PSG2P11465 335 aa18.13■□□□□ 0.49
USP6NL-204ENST00000606752 CXCL3P19876 107 aa18.13■□□□□ 0.49
USP6NL-204ENST00000606752 PRDX2P32119 198 aa18.13■□□□□ 0.49
USP6NL-204ENST00000606752 CCL8P80075 99 aa18.13■□□□□ 0.49
USP6NL-204ENST00000606752 TCTE3Q8IZS6 198 aa18.13■□□□□ 0.49
USP6NL-204ENST00000606752 OR5T2Q8NGG2 359 aa18.13■□□□□ 0.49
USP6NL-204ENST00000606752 OR11L1Q8NGX0 322 aa18.13■□□□□ 0.49
USP6NL-204ENST00000606752 C5orf66Q9H5L9 145 aa18.13■□□□□ 0.49
USP6NL-204ENST00000606752 PPP1R3CQ9UQK1 317 aa18.13■□□□□ 0.49
USP6NL-204ENST00000606752 B9A039 149 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 SCTP09683 121 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 CTXN2P0C2S0 81 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 LOXP28300 417 aaPredicted RBP18.12■□□□□ 0.49
USP6NL-204ENST00000606752 GLP1RP43220 463 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 KCNJ3P48549 501 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 TAS2R31P59538 309 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 COL10A1Q03692 680 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 TESK1Q15569 626 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 MST1LQ2TV78 715 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 IGSF11Q5DX21 431 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 CD177Q8N6Q3 437 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 ADAD2Q8NCV1 583 aaKnown RBP18.12■□□□□ 0.49
USP6NL-204ENST00000606752 TMEM185AQ8NFB2 350 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 LILRB1Q8NHL6 650 aaPredicted RBP18.12■□□□□ 0.49
USP6NL-204ENST00000606752 PIK3IP1Q96FE7 263 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 DHRS9Q9BPW9 319 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 TMEM204Q9BSN7 226 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 MS4A5Q9H3V2 200 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 LIME1Q9H400 295 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 IGSF10Q6WRI0 2623 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 RCC1P18754 421 aaPredicted RBP18.12■□□□□ 0.49
USP6NL-204ENST00000606752 FCGR2CP31995 323 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 DHRS2Q13268 280 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 ATXN7L3Q14CW9 347 aaPredicted RBP18.12■□□□□ 0.49
USP6NL-204ENST00000606752 ZNF672Q499Z4 452 aaPredicted RBP18.12■□□□□ 0.49
USP6NL-204ENST00000606752 MOB1BQ7L9L4 216 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 ZCCHC24Q8N2G6 241 aaKnown RBP18.12■□□□□ 0.49
USP6NL-204ENST00000606752 TMPRSS13Q9BYE2 586 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 EGLN1Q9GZT9 426 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 ZNF222Q9UK12 451 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 MGAT4AQ9UM21 535 aa18.12■□□□□ 0.49
USP6NL-204ENST00000606752 IGKV1D-17A0A075B6S4 117 aa18.11■□□□□ 0.49
USP6NL-204ENST00000606752 AKR1C4P17516 323 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms