RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 ICE1Q9Y2F5 2266 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 LRRC30A6NM36 301 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 OR2AT4A6NND4 320 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 TRDCB7Z8K6 153 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 SPRY3O43610 288 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 HNRNPCP07910 306 aaKnown RBP eCLIP10.34□□□□□ -0.752e-6■□□□□ 8.9
NEDD8-MDP1-203ENST00000604306 OR5H8P0DN80 308 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 IGFBP2P18065 325 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 PPOXP50336 477 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 CDSNQ15517 529 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 TEX36Q5VZQ5 186 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 GCSAMQ8N6F7 178 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 LINC01560Q8TB33 94 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 MRGPRFQ96AM1 343 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 ZNF486Q96H40 463 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 CNTNAP3BQ96NU0 1288 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 HDHD3Q9BSH5 251 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 CABLES2Q9BTV7 478 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 CNTNAP3Q9BZ76 1288 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 UFSP2Q9NUQ7 469 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 ZNF230Q9UIE0 474 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 ZNF221Q9UK13 617 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 GPR132Q9UNW8 380 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 FLVCR2Q9UPI3 526 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 NBASA2RRP1 2371 aa10.34□□□□□ -0.75
NEDD8-MDP1-203ENST00000604306 IGKV1D-8A0A087WSZ0 117 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 TMEM30CPA0ZSE6 113 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 FABP7O15540 132 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 RLN1P04808 185 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 OR4E1P0C645 316 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SULT1A3P0DMM9 295 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SULT1A4P0DMN0 295 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 IRF2P14316 349 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 GRNP28799 593 aaKnown RBP10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 UQCRFS1P47985 274 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 HLA-DRB3P79483 266 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 DHODHQ02127 395 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SWI5Q1ZZU3 235 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 TMEM128Q5BJH2 165 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 AADACL3Q5VUY0 350 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 LPCAT3Q6P1A2 487 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 C11orf88Q6PI97 169 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ZNF826PQ6ZT77 177 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 MOGAT3Q86VF5 341 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ZFAND1Q8TCF1 268 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ZNF431Q8TF32 576 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 RDH5Q92781 318 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ST6GAL2Q96JF0 529 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SNX22Q96L94 193 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 FAM234AQ9H0X4 552 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 WDR13Q9H1Z4 485 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 CISD1Q9NZ45 108 aaKnown RBP10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ZNF222Q9UK12 451 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 PPP1R3CQ9UQK1 317 aa10.33□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 CACNA1BQ00975 2339 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 A0A0B4J2A0 478 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 HS3ST1O14792 307 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SIAH2O43255 324 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ZNF737O75373 536 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 TK1P04183 234 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 CTSDP07339 412 aaPredicted RBP10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 PSG2P11465 335 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ANXA7P20073 488 aaKnown RBP10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 DUSP1P28562 367 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SNRPD2P62316 118 aaKnown RBP10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 PDCD1Q15116 288 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 HMGN3Q15651 99 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 KCNJ8Q15842 424 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 MST1LQ2TV78 715 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 C6orf183Q5T699 404 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 Q6ZPA2 131 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 BATF2Q8N1L9 274 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ZNF561Q8N587 486 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 OR5D13Q8NGL4 314 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 MOB3AQ96BX8 217 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SDSLQ96GA7 329 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SAP30LQ9HAJ7 183 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 DYNLRB1Q9NP97 96 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 DNAJB11Q9UBS4 358 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SHPKQ9UHJ6 478 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 VSIG4Q9Y279 399 aa10.32□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 IGSF10Q6WRI0 2623 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 OOEPA6NGQ2 149 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 RFPL4AA6NLU0 287 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 RFPL4AL1F8VTS6 287 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SIRPB1O00241 398 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 MGST3O14880 152 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 WNT9BO14905 357 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 PSPNO60542 156 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ZG16O60844 167 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 TUSC2O75896 110 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 VSIG10L2P0DP72 767 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ANXA3P12429 323 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 HLA-GP17693 338 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 EGR1P18146 543 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ZBTB25P24278 435 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ERP29P30040 261 aaKnown RBP10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 PRDX2P32119 198 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 OR3A1P47881 315 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms