RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 PIGTQ969N2 578 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 WFIKKN1Q96NZ8 548 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 ST6GALNAC5Q9BVH7 336 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 PLEKHJ1Q9NW61 149 aa9.98□□□□□ -0.81
VRK3-223ENST00000601341 CST4P01036 141 aa9.97□□□□□ -0.81
VRK3-223ENST00000601341 IFNA2P01563 188 aa9.97□□□□□ -0.81
VRK3-223ENST00000601341 CSTBP04080 98 aaKnown RBP9.97□□□□□ -0.81
VRK3-223ENST00000601341 PRB1P04280 392 aa9.97□□□□□ -0.81
VRK3-223ENST00000601341 SELEP16581 610 aa9.97□□□□□ -0.81
VRK3-223ENST00000601341 EIF5AL1Q6IS14 154 aaKnown RBP9.97□□□□□ -0.81
VRK3-223ENST00000601341 DHRS11Q6UWP2 260 aa9.97□□□□□ -0.81
VRK3-223ENST00000601341 ZNF843Q8N446 348 aa9.97□□□□□ -0.81
VRK3-223ENST00000601341 ZSCAN4Q8NAM6 433 aaPredicted RBP9.97□□□□□ -0.81
VRK3-223ENST00000601341 KLF14Q8TD94 323 aaPredicted RBP9.97□□□□□ -0.81
VRK3-223ENST00000601341 RNF141Q8WVD5 230 aa9.97□□□□□ -0.81
VRK3-223ENST00000601341 PIGCQ92535 297 aa9.97□□□□□ -0.81
VRK3-223ENST00000601341 MARC2Q969Z3 335 aa9.97□□□□□ -0.81
VRK3-223ENST00000601341 MARS2Q96GW9 593 aaKnown RBP9.97□□□□□ -0.81
VRK3-223ENST00000601341 PAPOLGQ9BWT3 736 aaKnown RBP9.97□□□□□ -0.81
VRK3-223ENST00000601341 GPR173Q9NS66 373 aa9.97□□□□□ -0.81
VRK3-223ENST00000601341 TAS2R3Q9NYW6 316 aa9.97□□□□□ -0.81
VRK3-223ENST00000601341 GPR160Q9UJ42 338 aa9.97□□□□□ -0.81
VRK3-223ENST00000601341 ANXA10Q9UJ72 324 aa9.97□□□□□ -0.81
VRK3-223ENST00000601341 SLC7A11Q9UPY5 501 aa9.97□□□□□ -0.81
VRK3-223ENST00000601341 C13orf42A0A1B0GVH6 325 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 FAM90A10PA6NDY2 464 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 FAM90A18PA6NE21 464 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 FAM90A16PA6NEW6 464 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 FAM90A20PA6NIJ5 464 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 FAM90A8PA6NJQ4 464 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 FAM90A7PA6NKC0 464 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 ANKRD30BLA7E2S9 258 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 FAM90A22PA8MWA6 464 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 FAM90A12PA8MX19 464 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 FAM90A5PA8MXJ8 464 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 FAM90A23PA8MXZ1 464 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 FAM90A15PP0C7V4 464 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 FAM90A13PP0C7W8 464 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 FAM90A14PP0C7W9 464 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 FAM90A24PP0C7X0 464 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 TMEM225BP0DP42 221 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 PGAM2P15259 253 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 FUT6P51993 359 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 ERVS71-1P61550 626 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 RSU1Q15404 277 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 CDSNQ15517 529 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 ZNF718Q3SXZ3 478 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 ELP2Q6IA86 826 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 OR2T2Q6IF00 324 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 RTN4RL2Q86UN3 420 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 SGPP2Q8IWX5 399 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 POC1AQ8NBT0 407 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 Q8NFD4 153 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 NPRL2Q8WTW4 380 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 DCUN1D4Q92564 292 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 RELNP78509 3460 aa9.96□□□□□ -0.81
VRK3-223ENST00000601341 ZNF850A8MQ14 1090 aa9.96□□□□□ -0.82
VRK3-223ENST00000601341 ZG16O60844 167 aa9.96□□□□□ -0.82
VRK3-223ENST00000601341 SCO1O75880 301 aa9.96□□□□□ -0.82
VRK3-223ENST00000601341 GCH1P30793 250 aa9.96□□□□□ -0.82
VRK3-223ENST00000601341 GLRXP35754 106 aa9.96□□□□□ -0.82
VRK3-223ENST00000601341 RBMXP38159 391 aaKnown RBP9.96□□□□□ -0.82
VRK3-223ENST00000601341 RPS23P62266 143 aaKnown RBP9.96□□□□□ -0.82
VRK3-223ENST00000601341 PSG7Q13046 419 aa9.96□□□□□ -0.82
VRK3-223ENST00000601341 SRSF7Q16629 238 aaKnown RBP eCLIP9.96□□□□□ -0.82
VRK3-223ENST00000601341 ANKRD55Q3KP44 614 aa9.96□□□□□ -0.82
VRK3-223ENST00000601341 DMRTC1Q5HYR2 192 aa9.96□□□□□ -0.82
VRK3-223ENST00000601341 PLCXD3Q63HM9 321 aa9.96□□□□□ -0.82
VRK3-223ENST00000601341 ZNF808Q8N4W9 903 aaPredicted RBP9.96□□□□□ -0.82
VRK3-223ENST00000601341 BHLHE23Q8NDY6 225 aa9.96□□□□□ -0.82
VRK3-223ENST00000601341 OR5D18Q8NGL1 313 aa9.96□□□□□ -0.82
VRK3-223ENST00000601341 SAT2Q96F10 170 aaPredicted RBP9.96□□□□□ -0.82
VRK3-223ENST00000601341 BORCS8Q96FH0 119 aa9.96□□□□□ -0.82
VRK3-223ENST00000601341 GALNT14Q96FL9 552 aa9.96□□□□□ -0.82
VRK3-223ENST00000601341 ZFP57Q9NU63 452 aa9.96□□□□□ -0.82
VRK3-223ENST00000601341 NECAP2Q9NVZ3 263 aa9.96□□□□□ -0.82
VRK3-223ENST00000601341 MPC1Q9Y5U8 109 aa9.96□□□□□ -0.82
VRK3-223ENST00000601341 PRR14LQ5THK1 2151 aa9.95□□□□□ -0.82
VRK3-223ENST00000601341 CRYM-AS1A6NIL9 109 aa9.95□□□□□ -0.82
VRK3-223ENST00000601341 MPTX1A8MV57 137 aa9.95□□□□□ -0.82
VRK3-223ENST00000601341 IQCF6A8MYZ5 107 aa9.95□□□□□ -0.82
VRK3-223ENST00000601341 CLDN14O95500 239 aa9.95□□□□□ -0.82
VRK3-223ENST00000601341 CHATP28329 748 aa9.95□□□□□ -0.82
VRK3-223ENST00000601341 MPV17P39210 176 aa9.95□□□□□ -0.82
VRK3-223ENST00000601341 UCP3P55916 312 aa9.95□□□□□ -0.82
VRK3-223ENST00000601341 NKX6-1P78426 367 aaPredicted RBP9.95□□□□□ -0.82
VRK3-223ENST00000601341 PRDX4Q13162 271 aa9.95□□□□□ -0.82
VRK3-223ENST00000601341 MBNL2Q5VZF2 373 aaKnown RBP9.95□□□□□ -0.82
VRK3-223ENST00000601341 ZDHHC23Q8IYP9 409 aa9.95□□□□□ -0.82
VRK3-223ENST00000601341 SLC38A6Q8IZM9 456 aa9.95□□□□□ -0.82
VRK3-223ENST00000601341 LRTM2Q8N967 370 aa9.95□□□□□ -0.82
VRK3-223ENST00000601341 ITLN2Q8WWU7 325 aaPredicted RBP9.95□□□□□ -0.82
VRK3-223ENST00000601341 HIST1H2AAQ96QV6 131 aa9.95□□□□□ -0.82
VRK3-223ENST00000601341 ESRP2Q9H6T0 727 aaKnown RBP9.95□□□□□ -0.82
VRK3-223ENST00000601341 METTL8Q9H825 291 aaKnown RBP9.95□□□□□ -0.82
VRK3-223ENST00000601341 ELL3Q9HB65 397 aaPredicted RBP9.95□□□□□ -0.82
VRK3-223ENST00000601341 CYTL1Q9NRR1 136 aa9.95□□□□□ -0.82
VRK3-223ENST00000601341 KCNIP3Q9Y2W7 256 aa9.95□□□□□ -0.82
VRK3-223ENST00000601341 FAM230AA0A1W2PPH8 454 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 DPRXA6NFQ7 191 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms