RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 KCNJ3P48549 501 aa16.97■□□□□ 0.31
PNKP-215ENST00000600910 GNB2P62879 340 aa16.97■□□□□ 0.31
PNKP-215ENST00000600910 AESQ08117 197 aa16.97■□□□□ 0.31
PNKP-215ENST00000600910 EDDM3AQ14507 147 aa16.97■□□□□ 0.31
PNKP-215ENST00000600910 ESCO2Q56NI9 601 aa16.97■□□□□ 0.31
PNKP-215ENST00000600910 WDR25Q64LD2 544 aaPredicted RBP16.97■□□□□ 0.31
PNKP-215ENST00000600910 GDPD3Q7L5L3 318 aa16.97■□□□□ 0.31
PNKP-215ENST00000600910 SSBP3Q9BWW4 388 aaPredicted RBP16.97■□□□□ 0.31
PNKP-215ENST00000600910 ETAA1Q9NY74 926 aa16.97■□□□□ 0.31
PNKP-215ENST00000600910 AK3Q9UIJ7 227 aa16.97■□□□□ 0.31
PNKP-215ENST00000600910 SETXQ7Z333 2677 aaKnown RBP16.97■□□□□ 0.31
PNKP-215ENST00000600910 TMEM235A6NFC5 223 aa16.96■□□□□ 0.31
PNKP-215ENST00000600910 NPY4RP50391 375 aa16.96■□□□□ 0.31
PNKP-215ENST00000600910 ARL6IP1Q15041 203 aa16.96■□□□□ 0.31
PNKP-215ENST00000600910 TPRX1Q8N7U7 411 aa16.96■□□□□ 0.31
PNKP-215ENST00000600910 COQ2Q96H96 371 aa16.96■□□□□ 0.31
PNKP-215ENST00000600910 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.96■□□□□ 0.31
PNKP-215ENST00000600910 SERPINE3A8MV23 424 aa16.96■□□□□ 0.3
PNKP-215ENST00000600910 PHF1O43189 567 aaPredicted RBP16.96■□□□□ 0.3
PNKP-215ENST00000600910 HLA-DQB1P01920 261 aa16.96■□□□□ 0.3
PNKP-215ENST00000600910 HEXAP06865 529 aa16.96■□□□□ 0.3
PNKP-215ENST00000600910 GSTP1P09211 210 aaKnown RBP16.96■□□□□ 0.3
PNKP-215ENST00000600910 PTHLHP12272 177 aa16.96■□□□□ 0.3
PNKP-215ENST00000600910 MNDAP41218 407 aa16.96■□□□□ 0.3
PNKP-215ENST00000600910 EDDM3BP56851 147 aa16.96■□□□□ 0.3
PNKP-215ENST00000600910 KRBOX4Q5JUW0 171 aa16.96■□□□□ 0.3
PNKP-215ENST00000600910 CCDC190Q86UF4 302 aa16.96■□□□□ 0.3
PNKP-215ENST00000600910 H1FXQ92522 213 aaKnown RBP16.96■□□□□ 0.3
PNKP-215ENST00000600910 AUNIPQ9H7T9 357 aa16.96■□□□□ 0.3
PNKP-215ENST00000600910 GLIPR1P48060 266 aa16.95■□□□□ 0.3
PNKP-215ENST00000600910 LOXL1Q08397 574 aaPredicted RBP16.95■□□□□ 0.3
PNKP-215ENST00000600910 HACD4Q5VWC8 232 aa16.95■□□□□ 0.3
PNKP-215ENST00000600910 RSBN1Q5VWQ0 802 aaPredicted RBP16.95■□□□□ 0.3
PNKP-215ENST00000600910 ZNF497Q6ZNH5 498 aa16.95■□□□□ 0.3
PNKP-215ENST00000600910 SNX29P2Q8IUI4 249 aa16.95■□□□□ 0.3
PNKP-215ENST00000600910 MAPK1IP1LQ8NDC0 245 aa16.95■□□□□ 0.3
PNKP-215ENST00000600910 HDHD3Q9BSH5 251 aaPredicted RBP16.95■□□□□ 0.3
PNKP-215ENST00000600910 A0A0G2JMP0 313 aa16.94■□□□□ 0.3
PNKP-215ENST00000600910 A0A0X1KG70 313 aa16.94■□□□□ 0.3
PNKP-215ENST00000600910 FABP12A6NFH5 140 aa16.94■□□□□ 0.3
PNKP-215ENST00000600910 FAM157AC9JC47 383 aa16.94■□□□□ 0.3
PNKP-215ENST00000600910 GPR37O15354 613 aa16.94■□□□□ 0.3
PNKP-215ENST00000600910 PAX5Q02548 391 aa16.94■□□□□ 0.3
PNKP-215ENST00000600910 ARFRP1Q13795 201 aa16.94■□□□□ 0.3
PNKP-215ENST00000600910 IL18Q14116 193 aa16.94■□□□□ 0.3
PNKP-215ENST00000600910 FAM131AQ6UXB0 335 aa16.94■□□□□ 0.3
PNKP-215ENST00000600910 OR4M2Q8NGB6 313 aa16.94■□□□□ 0.3
PNKP-215ENST00000600910 GCDHQ92947 438 aaPredicted RBP16.94■□□□□ 0.3
PNKP-215ENST00000600910 CMSS1Q9BQ75 279 aaKnown RBP16.94■□□□□ 0.3
PNKP-215ENST00000600910 MELTFP08582 738 aa16.93■□□□□ 0.3
PNKP-215ENST00000600910 ZFP36P26651 326 aaKnown RBP16.93■□□□□ 0.3
PNKP-215ENST00000600910 ERP29P30040 261 aaKnown RBP16.93■□□□□ 0.3
PNKP-215ENST00000600910 P2RX3P56373 397 aa16.93■□□□□ 0.3
PNKP-215ENST00000600910 PNLIPRP3Q17RR3 467 aa16.93■□□□□ 0.3
PNKP-215ENST00000600910 SPANXN2Q5MJ10 180 aa16.93■□□□□ 0.3
PNKP-215ENST00000600910 SLC35E4Q6ICL7 350 aa16.93■□□□□ 0.3
PNKP-215ENST00000600910 BAIAP2L2Q6UXY1 529 aa16.93■□□□□ 0.3
PNKP-215ENST00000600910 LINC00299Q6ZSB3 139 aa16.93■□□□□ 0.3
PNKP-215ENST00000600910 BTN2A1Q7KYR7 527 aa16.93■□□□□ 0.3
PNKP-215ENST00000600910 NUDCD2Q8WVJ2 157 aa16.93■□□□□ 0.3
PNKP-215ENST00000600910 ABHD1Q96SE0 405 aa16.93■□□□□ 0.3
PNKP-215ENST00000600910 SOSTQ9BQB4 213 aa16.93■□□□□ 0.3
PNKP-215ENST00000600910 KIF25Q9UIL4 384 aa16.93■□□□□ 0.3
PNKP-215ENST00000600910 V9GYH0 126 aa16.93■□□□□ 0.3
PNKP-215ENST00000600910 MALRD1Q5VYJ5 2156 aa16.93■□□□□ 0.3
PNKP-215ENST00000600910 TMEM30CPA0ZSE6 113 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 KIAA1324LA8MWY0 1029 aaPredicted RBP16.92■□□□□ 0.3
PNKP-215ENST00000600910 CA11O75493 328 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 CD3GP09693 182 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 ETV6P41212 452 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 GNG2P59768 71 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 LCN2P80188 198 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 MRPS15P82914 257 aaKnown RBP16.92■□□□□ 0.3
PNKP-215ENST00000600910 GAPTQ8N292 157 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 OR4K15Q8NH41 348 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 DCTN5Q9BTE1 182 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 C19orf12Q9NSK7 152 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 DOCK11Q5JSL3 2073 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 MEIKINA0A087WXM9 373 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 ODAMA1E959 279 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 MEX3AA1L020 520 aaKnown RBP16.92■□□□□ 0.3
PNKP-215ENST00000600910 FUOMA2VDF0 154 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 A8MXK9 166 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 MT-ND4P03905 459 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 RPL31P62899 125 aaKnown RBP16.92■□□□□ 0.3
PNKP-215ENST00000600910 PYHIN1Q6K0P9 492 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 MRPL30Q8TCC3 161 aaKnown RBP16.92■□□□□ 0.3
PNKP-215ENST00000600910 CHMP1AQ9HD42 196 aaPredicted RBP16.92■□□□□ 0.3
PNKP-215ENST00000600910 C12orf4Q9NQ89 552 aa16.92■□□□□ 0.3
PNKP-215ENST00000600910 ITPR3Q14573 2671 aa16.91■□□□□ 0.3
PNKP-215ENST00000600910 MYO9AB2RTY4 2548 aa16.91■□□□□ 0.3
PNKP-215ENST00000600910 C22orf46C9J442 243 aa16.91■□□□□ 0.3
PNKP-215ENST00000600910 TPPPO94811 219 aa16.91■□□□□ 0.3
PNKP-215ENST00000600910 NAPSAO96009 420 aa16.91■□□□□ 0.3
PNKP-215ENST00000600910 PITPNAQ00169 270 aa16.91■□□□□ 0.3
PNKP-215ENST00000600910 GUCA2AQ02747 115 aa16.91■□□□□ 0.3
PNKP-215ENST00000600910 CIARTQ8N365 385 aaPredicted RBP16.91■□□□□ 0.3
PNKP-215ENST00000600910 CCDC107Q8WV48 283 aa16.91■□□□□ 0.3
PNKP-215ENST00000600910 LPAR2Q9HBW0 351 aa16.91■□□□□ 0.3
PNKP-215ENST00000600910 RABL2AQ9UBK7 228 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms