RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 HSPA13P48723 471 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 SNU13P55769 128 aaKnown RBP8.35□□□□□ -1.07
VPS4B-207ENST00000591519 MTCP1P56278 107 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 RPL22L1Q6P5R6 122 aaKnown RBP8.35□□□□□ -1.07
VPS4B-207ENST00000591519 RNF144BQ7Z419 303 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 OR4F17Q8NGA8 305 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 OR4S1Q8NGB4 309 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 OR5D18Q8NGL1 313 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 OR52N1Q8NH53 320 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 CORO2AQ92828 525 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 OR4F4Q96R69 305 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 CITED2Q99967 270 aaPredicted RBP8.35□□□□□ -1.07
VPS4B-207ENST00000591519 ANKRD60Q9BZ19 345 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 CCDC90BQ9GZT6 254 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 MMP28Q9H239 520 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 ZCCHC4Q9H5U6 513 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 NEK6Q9HC98 313 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 FKBP14Q9NWM8 211 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 SESN1Q9Y6P5 492 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 IGHV2-26A0A0B4J1V2 119 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 H3BUI4 141 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 MGST3O14880 152 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 OGG1O15527 345 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 HAND1O96004 215 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 MT-ND2P03891 347 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 CDK1P06493 297 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 LMO1P25800 156 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 NPBWR2P48146 333 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 RBP2P50120 134 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 ATP1B3P54709 279 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 CD83Q01151 205 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 DYNC1I2Q13409 638 aaKnown RBP8.34□□□□□ -1.07
VPS4B-207ENST00000591519 GRK1Q15835 563 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 CCDC58Q4VC31 144 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 PLA1AQ53H76 456 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 SPIN3Q5JUX0 258 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 UTS2BQ765I0 119 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 C16orf82Q7Z2V1 217 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 SATL1Q86VE3 508 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 TMEM219Q86XT9 240 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 FAM58AQ8N1B3 248 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 NANOGP1Q8N7R0 232 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 MYDGFQ969H8 173 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 OPALINQ96PE5 141 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 CLEC7AQ9BXN2 247 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 TMEM133Q9H2Q1 129 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 RHOFQ9HBH0 211 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 TAS2R4Q9NYW5 299 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 ERGIC3Q9Y282 383 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 UBE2J1Q9Y385 318 aaPredicted RBP8.34□□□□□ -1.07
VPS4B-207ENST00000591519 TPRKBQ9Y3C4 175 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 HILPDAQ9Y5L2 63 aa8.34□□□□□ -1.07
VPS4B-207ENST00000591519 A0A1W2PPK0 400 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 MEX3AA1L020 520 aaKnown RBP8.33□□□□□ -1.08
VPS4B-207ENST00000591519 MMP23AO75900 390 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 CYB5AP00167 134 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 ALDOBP05062 364 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 CELP19835 753 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 BCL3P20749 454 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 PRKACBP22694 351 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 HTR1DP28221 377 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 P2RX3P56373 397 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 WNT4P56705 351 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 BDH1Q02338 343 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 PDZK1IP1Q13113 114 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 EDDM3AQ14507 147 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 MED22Q15528 200 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 NSUN5P1Q3KNT7 163 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 DMKNQ6E0U4 476 aaPredicted RBP8.33□□□□□ -1.08
VPS4B-207ENST00000591519 OR52W1Q6IF63 320 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 LHFPL2Q6ZUX7 228 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 RTN4RL2Q86UN3 420 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 LYG1Q8N1E2 194 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 TPRX1Q8N7U7 411 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 ZNF485Q8NCK3 441 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 OR51A2Q8NGJ7 313 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 OR4P4Q8NGL7 312 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 HAVCR2Q8TDQ0 301 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 GPR148Q8TDV2 347 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 GHSRQ92847 366 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 EMG1Q92979 244 aaKnown RBP8.33□□□□□ -1.08
VPS4B-207ENST00000591519 SPSB1Q96BD6 273 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 R3HDM4Q96D70 268 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 SMIM19Q96E16 107 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 OR5M11Q96RB7 305 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 HMG20AQ9NP66 347 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 NECAP2Q9NVZ3 263 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 RBFOX1Q9NWB1 397 aaKnown RBP8.33□□□□□ -1.08
VPS4B-207ENST00000591519 TAS2R3Q9NYW6 316 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 DPM3Q9P2X0 92 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 IL36RNQ9UBH0 155 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 GLS2Q9UI32 602 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 RAB26Q9ULW5 256 aa8.33□□□□□ -1.08
VPS4B-207ENST00000591519 KIAA2026Q5HYC2 2103 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 F2RL2O00254 374 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 SH2D1BO14796 132 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 RGS10O43665 173 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 SULT1B1O43704 296 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 IGLV1-47P01700 117 aa8.32□□□□□ -1.08
VPS4B-207ENST00000591519 PRB2P02812 416 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms