RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619	HTR1F	P30939	366 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	CHRNA7	P36544	502 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	VHL	P40337	213 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	CDC42	P60953	191 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	DYRK1A	Q13627	763 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	LTC4S	Q16873	150 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	CLVS2	Q5SYC1	327 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	ERICH5	Q6P6B1	374 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	LAX1	Q8IWV1	398 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	ENTHD1	Q8IYW4	607 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	TMEM217	Q8N7C4	229 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	YIPF7	Q8N8F6	280 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	OR2K2	Q8NGT1	345 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	OR10X1	Q8NGY0	326 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	OR6N2	Q8NGY6	317 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	OR52J3	Q8NH60	311 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	RFESD	Q8TAC1	157 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	OR51E1	Q8TCB6	317 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	THEM6	Q8WUY1	208 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	COQ2	Q96H96	371 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	DHRS1	Q96LJ7	313 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	SPACA5	Q96QH8	159 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	MBOAT4	Q96T53	435 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	OSBPL10	Q9BXB5	764 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	CADM1	Q9BY67	442 aa	Known RBP	4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	LINC00574	Q9H8X3	128 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	GPR84	Q9NQS5	396 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	IDI2-AS1	Q9NZ38	188 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	TP53TG1	Q9Y2A0	90 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	FAM230A	A0A1W2PPH8	454 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	ANKRD34B	A5PLL1	514 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	NPIPB11	E5RHQ5	1161 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	SH2D1B	O14796	132 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	MITF	O75030	526 aa	Predicted RBP	4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	ENTPD6	O75354	484 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	OR2H2	O95918	312 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	SNU13	P55769	128 aa	Known RBP	4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	IFFO1	Q0D2I5	559 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	CYLC2	Q14093	348 aa	Predicted RBP	4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	LGALS9B	Q3B8N2	356 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	IFI44L	Q53G44	452 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	KRBOX4	Q5JUW0	171 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	LIN54	Q6MZP7	749 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	SLC16A12	Q6ZSM3	486 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619		Q6ZWC4	215 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	SLC25A26	Q70HW3	274 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	FKBP9P1	Q75LS8	142 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	SHF	Q7M4L6	423 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	HDX	Q7Z353	690 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	ERI1	Q8IV48	349 aa	Known RBP	4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	FAM58A	Q8N1B3	248 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	ZNF565	Q8N9K5	539 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	OR6K6	Q8NGW6	343 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	RCN3	Q96D15	328 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	INTS14	Q96SY0	518 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	SH3GL1	Q99961	368 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	CCDC28B	Q9BUN5	200 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	DGCR6L	Q9BY27	220 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	ANKRD60	Q9BZ19	345 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	EGLN3	Q9H6Z9	239 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	RBFOX1	Q9NWB1	397 aa	Known RBP	4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	FAM206A	Q9NX38	181 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	CNOT2	Q9NZN8	540 aa	Known RBP	4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	FBXL17	Q9UF56	701 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	FBXL7	Q9UJT9	491 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	FOXA2	Q9Y261	457 aa	Predicted RBP	4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	ENPP4	Q9Y6X5	453 aa		4.79	□□□□□ -1.64
DNMT1-222	ENST00000590619	MYCBP2	O75592	4640 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	TMEM269	A0A1B0GVZ9	245 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	ACOD1	A6NK06	481 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	EPM2A	B3EWF7	344 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	ANGPT2	O15123	496 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	DHRS3	O75911	302 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	ZNF682	O95780	498 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	HLA-DRB1	P01911	266 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	LYN	P07948	512 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	CTRB1	P17538	263 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	BCL3	P20749	454 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	GSTT1	P30711	240 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	KIR2DS2	P43631	304 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	GSS	P48637	474 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	CRIP2	P52943	208 aa	Predicted RBP	4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	BLVRA	P53004	296 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	TPPP2	P59282	170 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	PSMA6	P60900	246 aa	Known RBP	4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	NDP	Q00604	133 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	BNIP1	Q12981	228 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	APOF	Q13790	326 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	CRMP1	Q14194	572 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	RBMS2	Q15434	407 aa	Known RBP	4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	UBE2V2	Q15819	145 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	TATDN3	Q17R31	274 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	ECSCR	Q19T08	205 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	DEFB114	Q30KQ6	69 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	CTRB2	Q6GPI1	263 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	CYP4Z1	Q86W10	505 aa		4.78	□□□□□ -1.64
DNMT1-222	ENST00000590619	COMMD2	Q86X83	199 aa		4.78	□□□□□ -1.64

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