RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 TMEM128Q5BJH2 165 aa16.73■□□□□ 0.27
TRIM47-204ENST00000587339 SHEQ5VZ18 495 aa16.73■□□□□ 0.27
TRIM47-204ENST00000587339 LYG2Q86SG7 212 aa16.73■□□□□ 0.27
TRIM47-204ENST00000587339 MOGAT3Q86VF5 341 aa16.73■□□□□ 0.27
TRIM47-204ENST00000587339 OR10Z1Q8NGY1 313 aa16.73■□□□□ 0.27
TRIM47-204ENST00000587339 TMPRSS13Q9BYE2 586 aa16.73■□□□□ 0.27
TRIM47-204ENST00000587339 TRBV6-6A0A0A6YYG2 114 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 SMLR1H3BR10 107 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 H7C1Q1 480 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 FABP7O15540 132 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 ZNF205O95201 554 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 PI3P19957 117 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 ZBTB25P24278 435 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 LMO1P25800 156 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 GLP1RP43220 463 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 C20orf204Q6ZNR8 217 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 C12orf45Q8N5I9 185 aaPredicted RBP16.72■□□□□ 0.27
TRIM47-204ENST00000587339 TMEM185AQ8NFB2 350 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 OR2AK2Q8NG84 335 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 LIME1Q9H400 295 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 DECR2Q9NUI1 292 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 RASL12Q9NYN1 266 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 PLCE1Q9P212 2302 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.72■□□□□ 0.27
TRIM47-204ENST00000587339 C9orf170A2RU37 121 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 SRRM5B3KS81 715 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 SHISA9B4DS77 424 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 TRDCB7Z8K6 153 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 PGAM2P15259 253 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 FCGR2CP31995 323 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 GATA4P43694 442 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 IGSF11Q5DX21 431 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 RTBDNQ9BSG5 229 aaPredicted RBP16.72■□□□□ 0.27
TRIM47-204ENST00000587339 NPTNQ9Y639 398 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 KALRNO60229 2985 aa16.72■□□□□ 0.27
TRIM47-204ENST00000587339 ACACBO00763 2458 aa16.71■□□□□ 0.27
TRIM47-204ENST00000587339 RFPL4AA6NLU0 287 aa16.71■□□□□ 0.27
TRIM47-204ENST00000587339 RFPL4AL1F8VTS6 287 aa16.71■□□□□ 0.27
TRIM47-204ENST00000587339 PSPNO60542 156 aa16.71■□□□□ 0.27
TRIM47-204ENST00000587339 CD3EP07766 207 aa16.71■□□□□ 0.27
TRIM47-204ENST00000587339 SCTP09683 121 aa16.71■□□□□ 0.27
TRIM47-204ENST00000587339 RBMXP38159 391 aaKnown RBP16.71■□□□□ 0.27
TRIM47-204ENST00000587339 ATXN7L3Q14CW9 347 aaPredicted RBP16.71■□□□□ 0.27
TRIM47-204ENST00000587339 ZNF497Q6ZNH5 498 aa16.71■□□□□ 0.27
TRIM47-204ENST00000587339 GCSAMQ8N6F7 178 aa16.71■□□□□ 0.27
TRIM47-204ENST00000587339 PLPPR1Q8TBJ4 325 aa16.71■□□□□ 0.27
TRIM47-204ENST00000587339 TUBAL3A6NHL2 446 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 POM121CA8CG34 1229 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 RCC1P18754 421 aaPredicted RBP16.7■□□□□ 0.26
TRIM47-204ENST00000587339 SERPINF1P36955 418 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 DMRTC2Q8IXT2 367 aaPredicted RBP16.7■□□□□ 0.26
TRIM47-204ENST00000587339 TMEM230Q96A57 120 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 CHIAQ9BZP6 476 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 DLL4Q9NR61 685 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 C14orf166Q9Y224 244 aaKnown RBP16.7■□□□□ 0.26
TRIM47-204ENST00000587339 IFNL4K9M1U5 179 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 GOSR2O14653 212 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 SLC22A5O76082 557 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 EGR1P18146 543 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 CD34P28906 385 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 GZMKP49863 264 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 SEC61A1P61619 476 aaKnown RBP16.7■□□□□ 0.26
TRIM47-204ENST00000587339 ZNF880Q6PDB4 577 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 C11orf88Q6PI97 169 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 BOLLQ8N9W6 283 aaKnown RBP16.7■□□□□ 0.26
TRIM47-204ENST00000587339 DIRC2Q96SL1 478 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 DHRS9Q9BPW9 319 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 TRAF4Q9BUZ4 470 aaPredicted RBP16.7■□□□□ 0.26
TRIM47-204ENST00000587339 GCM1Q9NP62 436 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 DNAJB11Q9UBS4 358 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 SLC23A1Q9UHI7 598 aa16.7■□□□□ 0.26
TRIM47-204ENST00000587339 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.69■□□□□ 0.26
TRIM47-204ENST00000587339 BET1O15155 118 aa16.69■□□□□ 0.26
TRIM47-204ENST00000587339 DUS4LO95620 317 aaKnown RBP16.69■□□□□ 0.26
TRIM47-204ENST00000587339 TK1P04183 234 aa16.69■□□□□ 0.26
TRIM47-204ENST00000587339 CTXN2P0C2S0 81 aa16.69■□□□□ 0.26
TRIM47-204ENST00000587339 NFYAP23511 347 aaPredicted RBP16.69■□□□□ 0.26
TRIM47-204ENST00000587339 ERP29P30040 261 aaKnown RBP16.69■□□□□ 0.26
TRIM47-204ENST00000587339 DHODHQ02127 395 aa16.69■□□□□ 0.26
TRIM47-204ENST00000587339 KCNJ8Q15842 424 aa16.69■□□□□ 0.26
TRIM47-204ENST00000587339 NLRC3Q7RTR2 1065 aa16.69■□□□□ 0.26
TRIM47-204ENST00000587339 FAM90A1Q86YD7 464 aa16.69■□□□□ 0.26
TRIM47-204ENST00000587339 GAPTQ8N292 157 aa16.69■□□□□ 0.26
TRIM47-204ENST00000587339 OR5T2Q8NGG2 359 aa16.69■□□□□ 0.26
TRIM47-204ENST00000587339 ZFAND1Q8TCF1 268 aa16.69■□□□□ 0.26
TRIM47-204ENST00000587339 CASTOR1Q8WTX7 329 aa16.69■□□□□ 0.26
TRIM47-204ENST00000587339 MITD1Q8WV92 249 aa16.69■□□□□ 0.26
TRIM47-204ENST00000587339 TOMM40LQ969M1 308 aa16.69■□□□□ 0.26
TRIM47-204ENST00000587339 PHB2Q99623 299 aa16.69■□□□□ 0.26
TRIM47-204ENST00000587339 TRAPPC2LQ9UL33 140 aa16.69■□□□□ 0.26
TRIM47-204ENST00000587339 CHD3Q12873 2000 aaKnown RBP16.69■□□□□ 0.26
TRIM47-204ENST00000587339 FAM172BPA6NC97 362 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 C17orf100A8MU93 164 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 E7EQL1 145 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 M0R233 179 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 GIPP09681 153 aaPredicted RBP16.68■□□□□ 0.26
TRIM47-204ENST00000587339 FXYD4P59646 89 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 HERPUD1Q15011 391 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 C2orf68Q2NKX9 166 aa16.68■□□□□ 0.26
TRIM47-204ENST00000587339 MOB1BQ7L9L4 216 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms