RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 HYLS1Q96M11 299 aa8.8□□□□□ -1
LIG3-203ENST00000585370 DIRC2Q96SL1 478 aa8.8□□□□□ -1
LIG3-203ENST00000585370 BEX2Q9BXY8 128 aa8.8□□□□□ -1
LIG3-203ENST00000585370 BEX1Q9HBH7 125 aa8.8□□□□□ -1
LIG3-203ENST00000585370 HES4Q9HCC6 221 aa8.8□□□□□ -1
LIG3-203ENST00000585370 CHMP1AQ9HD42 196 aaPredicted RBP8.8□□□□□ -1
LIG3-203ENST00000585370 ZNF69Q9UC07 566 aa8.8□□□□□ -1
LIG3-203ENST00000585370 NDRG3Q9UGV2 375 aa8.8□□□□□ -1
LIG3-203ENST00000585370 DUSP13Q9UII6 198 aa8.8□□□□□ -1
LIG3-203ENST00000585370 ZNF222Q9UK12 451 aa8.8□□□□□ -1
LIG3-203ENST00000585370 POU2F3Q9UKI9 436 aa8.8□□□□□ -1
LIG3-203ENST00000585370 ZDHHC8Q9ULC8 765 aa8.8□□□□□ -1
LIG3-203ENST00000585370 NPTNQ9Y639 398 aa8.8□□□□□ -1
LIG3-203ENST00000585370 ABCA4P78363 2273 aa8.8□□□□□ -1
LIG3-203ENST00000585370 HRNRQ86YZ3 2850 aaPredicted RBP8.8□□□□□ -1
LIG3-203ENST00000585370 ANKHD1Q8IWZ3 2542 aaKnown RBP8.8□□□□□ -1
LIG3-203ENST00000585370 A0A0B4J2A0 478 aa8.79□□□□□ -1
LIG3-203ENST00000585370 F8VVB4 439 aa8.79□□□□□ -1
LIG3-203ENST00000585370 F8VWA3 439 aa8.79□□□□□ -1
LIG3-203ENST00000585370 H0YL77 283 aa8.79□□□□□ -1
LIG3-203ENST00000585370 IFNL4K9M1U5 179 aa8.79□□□□□ -1
LIG3-203ENST00000585370 RHBDL1O75783 438 aa8.79□□□□□ -1
LIG3-203ENST00000585370 NAPSAO96009 420 aa8.79□□□□□ -1
LIG3-203ENST00000585370 OR5H8P0DN80 308 aa8.79□□□□□ -1
LIG3-203ENST00000585370 TNFSF4P23510 183 aa8.79□□□□□ -1
LIG3-203ENST00000585370 LMO1P25800 156 aa8.79□□□□□ -1
LIG3-203ENST00000585370 CCKARP32238 428 aa8.79□□□□□ -1
LIG3-203ENST00000585370 GLP1RP43220 463 aa8.79□□□□□ -1
LIG3-203ENST00000585370 KCNJ3P48549 501 aa8.79□□□□□ -1
LIG3-203ENST00000585370 DHODHQ02127 395 aa8.79□□□□□ -1
LIG3-203ENST00000585370 TMEM128Q5BJH2 165 aa8.79□□□□□ -1
LIG3-203ENST00000585370 ALKBH2Q6NS38 261 aa8.79□□□□□ -1
LIG3-203ENST00000585370 Q6P435 159 aa8.79□□□□□ -1
LIG3-203ENST00000585370 Q6ZR03 302 aa8.79□□□□□ -1
LIG3-203ENST00000585370 MOB1BQ7L9L4 216 aa8.79□□□□□ -1
LIG3-203ENST00000585370 LYG2Q86SG7 212 aa8.79□□□□□ -1
LIG3-203ENST00000585370 PEG10Q86TG7 708 aaKnown RBP8.79□□□□□ -1
LIG3-203ENST00000585370 WDR86Q86TI4 376 aa8.79□□□□□ -1
LIG3-203ENST00000585370 RTN4RL2Q86UN3 420 aa8.79□□□□□ -1
LIG3-203ENST00000585370 C11orf53Q8IXP5 236 aa8.79□□□□□ -1
LIG3-203ENST00000585370 C12orf45Q8N5I9 185 aaPredicted RBP8.79□□□□□ -1
LIG3-203ENST00000585370 SUMF2Q8NBJ7 301 aa8.79□□□□□ -1
LIG3-203ENST00000585370 OR11H7Q8NGC8 314 aa8.79□□□□□ -1
LIG3-203ENST00000585370 NEK7Q8TDX7 302 aa8.79□□□□□ -1
LIG3-203ENST00000585370 RNASE6Q93091 150 aaKnown RBP8.79□□□□□ -1
LIG3-203ENST00000585370 MRPL24Q96A35 216 aaKnown RBP8.79□□□□□ -1
LIG3-203ENST00000585370 SEC22CQ9BRL7 303 aa8.79□□□□□ -1
LIG3-203ENST00000585370 DPCDQ9BVM2 203 aaPredicted RBP8.79□□□□□ -1
LIG3-203ENST00000585370 ZNF436Q9C0F3 470 aaPredicted RBP8.79□□□□□ -1
LIG3-203ENST00000585370 Q9N2K0 584 aa8.79□□□□□ -1
LIG3-203ENST00000585370 DECR2Q9NUI1 292 aa8.79□□□□□ -1
LIG3-203ENST00000585370 SHPKQ9UHJ6 478 aa8.79□□□□□ -1
LIG3-203ENST00000585370 ZNF230Q9UIE0 474 aaPredicted RBP8.79□□□□□ -1
LIG3-203ENST00000585370 VSIG4Q9Y279 399 aa8.79□□□□□ -1
LIG3-203ENST00000585370 DPRXA6NFQ7 191 aa8.78□□□□□ -1
LIG3-203ENST00000585370 A6NLC8 198 aa8.78□□□□□ -1
LIG3-203ENST00000585370 OR2AT4A6NND4 320 aa8.78□□□□□ -1
LIG3-203ENST00000585370 ATP6V1G2-DDX39BF2Z307 99 aa8.78□□□□□ -1
LIG3-203ENST00000585370 F5H5P2 479 aa8.78□□□□□ -1
LIG3-203ENST00000585370 OR2A4O95047 310 aa8.78□□□□□ -1
LIG3-203ENST00000585370 KNG1P01042 644 aa8.78□□□□□ -1
LIG3-203ENST00000585370 GIPP09681 153 aaPredicted RBP8.78□□□□□ -1
LIG3-203ENST00000585370 ZNF44P15621 663 aa8.78□□□□□ -1
LIG3-203ENST00000585370 ZBTB25P24278 435 aa8.78□□□□□ -1
LIG3-203ENST00000585370 GATA4P43694 442 aa8.78□□□□□ -1
LIG3-203ENST00000585370 GZMKP49863 264 aa8.78□□□□□ -1
LIG3-203ENST00000585370 UCP3P55916 312 aa8.78□□□□□ -1
LIG3-203ENST00000585370 RAP2BP61225 183 aa8.78□□□□□ -1
LIG3-203ENST00000585370 SEC61A1P61619 476 aaKnown RBP8.78□□□□□ -1
LIG3-203ENST00000585370 SORDQ00796 357 aa8.78□□□□□ -1
LIG3-203ENST00000585370 DAZAP2Q15038 168 aaPredicted RBP8.78□□□□□ -1
LIG3-203ENST00000585370 SMIM21Q3B7S5 101 aa8.78□□□□□ -1
LIG3-203ENST00000585370 LIN54Q6MZP7 749 aa8.78□□□□□ -1
LIG3-203ENST00000585370 LPCAT3Q6P1A2 487 aa8.78□□□□□ -1
LIG3-203ENST00000585370 TMED4Q7Z7H5 227 aa8.78□□□□□ -1
LIG3-203ENST00000585370 WFDC8Q8IUA0 241 aa8.78□□□□□ -1
LIG3-203ENST00000585370 OR2AK2Q8NG84 335 aa8.78□□□□□ -1
LIG3-203ENST00000585370 OR2Z1Q8NG97 314 aa8.78□□□□□ -1
LIG3-203ENST00000585370 MARCH1Q8TCQ1 289 aa8.78□□□□□ -1
LIG3-203ENST00000585370 NRGNQ92686 78 aa8.78□□□□□ -1
LIG3-203ENST00000585370 FYTTD1Q96QD9 318 aaKnown RBP8.78□□□□□ -1
LIG3-203ENST00000585370 OR2A7Q96R45 310 aa8.78□□□□□ -1
LIG3-203ENST00000585370 CLEC4MQ9H2X3 399 aaPredicted RBP8.78□□□□□ -1
LIG3-203ENST00000585370 ESRP2Q9H6T0 727 aaKnown RBP8.78□□□□□ -1
LIG3-203ENST00000585370 FN3KRPQ9HA64 309 aa8.78□□□□□ -1
LIG3-203ENST00000585370 MSL2Q9HCI7 577 aa8.78□□□□□ -1
LIG3-203ENST00000585370 TAAR3PQ9P1P4 343 aa8.78□□□□□ -1
LIG3-203ENST00000585370 MGAT4CQ9UBM8 478 aa8.78□□□□□ -1
LIG3-203ENST00000585370 SLC23A1Q9UHI7 598 aa8.78□□□□□ -1
LIG3-203ENST00000585370 FZR1Q9UM11 496 aa8.78□□□□□ -1
LIG3-203ENST00000585370 C14orf166Q9Y224 244 aaKnown RBP8.78□□□□□ -1
LIG3-203ENST00000585370 TRAV24A0A0B4J272 114 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 A8MV72 311 aaPredicted RBP8.77□□□□□ -1.01
LIG3-203ENST00000585370 TRDCB7Z8K6 153 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 SDCBPO00560 298 aaPredicted RBP8.77□□□□□ -1.01
LIG3-203ENST00000585370 RGS11O94810 467 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 DUS4LO95620 317 aaKnown RBP8.77□□□□□ -1.01
LIG3-203ENST00000585370 DIRAS3O95661 229 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 THBDP07204 575 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 CTSDP07339 412 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms