RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 NUPL2O15504 423 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 KNG1P01042 644 aa12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 FUT6P51993 359 aa12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 UBE2NP61088 152 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 HMGN3Q15651 99 aa12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 SNAI3Q3KNW1 292 aa12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 GPR157Q5UAW9 335 aa12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 TMEM268Q5VZI3 342 aa12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 MDP1Q86V88 176 aa12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 ST6GALNAC3Q8NDV1 305 aa12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 LYPD6BQ8NI32 183 aa12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 NPRL2Q8WTW4 380 aa12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 BORCS8Q96FH0 119 aa12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 MICU1Q9BPX6 476 aa12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 CMSS1Q9BQ75 279 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 GSKIPQ9P0R6 139 aa12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 ATPIF1Q9UII2 106 aa12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 PRELID3BQ9Y3B1 194 aa12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 SPTA1P02549 2419 aa12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 TRGV8A0A0C4DH27 118 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM74A7A6NL05 159 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 E5RGE8 158 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 PLATP00750 562 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 LCATP04180 440 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 SFTPBP07988 381 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 CCL2P13500 99 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 BMP5P22003 454 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 CCNOP22674 350 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 GABRR1P24046 479 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 CHATP28329 748 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 OPRM1P35372 400 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 F2RL1P55085 397 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 PLP2Q04941 152 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 P2RY6Q15077 328 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 SRSF7Q16629 238 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM74A3Q4VXF1 159 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 HAGHLQ6PII5 290 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 ZNF474Q6S9Z5 364 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 OR4A4PQ8NGN8 299 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 RHOFQ9HBH0 211 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 SLC7A11Q9UPY5 501 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 NSG2Q9Y328 171 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 ACACBO00763 2458 aa12.83□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM90A10PA6NDY2 464 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM90A18PA6NE21 464 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM90A16PA6NEW6 464 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM90A20PA6NIJ5 464 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM90A8PA6NJQ4 464 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM90A7PA6NKC0 464 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM90A22PA8MWA6 464 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM90A12PA8MX19 464 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM90A5PA8MXJ8 464 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM90A23PA8MXZ1 464 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 KCNAB3O43448 404 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 NRASP01111 189 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM90A15PP0C7V4 464 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM90A13PP0C7W8 464 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM90A14PP0C7W9 464 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM90A24PP0C7X0 464 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 COX5BP10606 129 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 S100A10P60903 97 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 TMEM211Q6ICI0 200 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 LDLRAD3Q86YD5 345 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 C1orf162Q8NEQ5 155 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 OR51F2Q8NH61 342 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 ARV1Q9H2C2 271 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 GPR173Q9NS66 373 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 IGKV1D-8A0A087WSZ0 117 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 C5orf49A4QMS7 147 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 XRCC2O43543 280 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 CD5P06127 495 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FCGR3AP08637 254 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 ZNF728P0DKX0 622 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 ADCYAP1P18509 176 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 ACKR3P25106 362 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 HOXC12P31275 282 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 GGNBP1Q5YKI7 109 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 BTNL8Q6UX41 500 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 BHLHA15Q7RTS1 189 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 OSR2Q8N2R0 312 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 BOD1Q96IK1 185 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 NRIP2Q9BQI9 281 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 NAA60Q9H7X0 242 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 TREM1Q9NP99 234 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 RCC2Q9P258 522 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 AK3Q9UIJ7 227 aa12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 KLF2Q9Y5W3 355 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-236ENST00000584991 ZNF850A8MQ14 1090 aa12.81□□□□□ -0.36
CDK5RAP3-236ENST00000584991 H7C1Q1 480 aa12.81□□□□□ -0.36
CDK5RAP3-236ENST00000584991 GPR31O00270 319 aa12.81□□□□□ -0.36
CDK5RAP3-236ENST00000584991 MSTNO14793 375 aa12.81□□□□□ -0.36
CDK5RAP3-236ENST00000584991 SEC11BP0C7V7 166 aa12.81□□□□□ -0.36
CDK5RAP3-236ENST00000584991 HOXB1P14653 301 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-236ENST00000584991 CASP6P55212 293 aa12.81□□□□□ -0.36
CDK5RAP3-236ENST00000584991 SRPXP78539 464 aa12.81□□□□□ -0.36
CDK5RAP3-236ENST00000584991 IL13RA2Q14627 380 aa12.81□□□□□ -0.36
CDK5RAP3-236ENST00000584991 ABCA11PQ4W5N1 156 aa12.81□□□□□ -0.36
CDK5RAP3-236ENST00000584991 RPL7L1Q6DKI1 246 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-236ENST00000584991 Q6ZS49 121 aa12.81□□□□□ -0.36
CDK5RAP3-236ENST00000584991 FAM185AQ8N0U4 392 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms