RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 HAND1O96004 215 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 HEXAP06865 529 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 DUX4L2P0CJ85 424 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 DUX4L3P0CJ86 424 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 DUX4L4P0CJ87 422 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 DUX4L5P0CJ88 424 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 DUX4L6P0CJ89 424 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 DUX4L7P0CJ90 424 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 MNDAP41218 407 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 INPP1P49441 399 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 ZNF146Q15072 292 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 CDNFQ49AH0 187 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 SPIN3Q5JUX0 258 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 SIGIRRQ6IA17 410 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 DUX4L9Q6RFH8 374 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-216ENST00000583804 Q6ZTK2 550 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 NLRC3Q7RTR2 1065 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 SLC36A1Q7Z2H8 476 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 CD177Q8N6Q3 437 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 MAPK1IP1LQ8NDC0 245 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 OR56B1Q8NGI3 324 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 MAFIPQ8WZ33 124 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 TRIM63Q969Q1 353 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 NEIL1Q96FI4 390 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-216ENST00000583804 SULT4A1Q9BR01 284 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 FAAP24Q9BTP7 215 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 TM2D1Q9BX74 207 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 PECRQ9BY49 303 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 CHST6Q9GZX3 395 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 ZNF665Q9H7R5 613 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 PATZ1Q9HBE1 687 aaKnown RBP9.13□□□□□ -0.95
TOP3A-216ENST00000583804 DUX4Q9UBX2 424 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 FBLN5Q9UBX5 448 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 FAM240BA0A1B0GVZ2 78 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 FAM172BPA6NC97 362 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 TNFRSF13BO14836 293 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-216ENST00000583804 NDUFB3O43676 98 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 LANCL1O43813 399 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 CHRM2P08172 466 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 WNT2P09544 360 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 SELLP14151 372 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 HIST1H1DP16402 221 aaKnown RBP9.12□□□□□ -0.95
TOP3A-216ENST00000583804 AMY2BP19961 511 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 TMEM50BP56557 158 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 IL13RA1P78552 427 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 COL10A1Q03692 680 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 ARFRP1Q13795 201 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 IL13RA2Q14627 380 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 ZFP69Q49AA0 526 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 ATPAF1Q5TC12 328 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-216ENST00000583804 RAB12Q6IQ22 244 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 ZNF788Q6ZQV5 615 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 TCTE3Q8IZS6 198 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 FAM216BQ8N7L0 139 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 ASCC1Q8N9N2 400 aaKnown RBP9.12□□□□□ -0.95
TOP3A-216ENST00000583804 TMEM185AQ8NFB2 350 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 OR8B3Q8NGG8 313 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 OR52I2Q8NH67 350 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 PTX4Q96A99 478 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 CREB3L1Q96BA8 519 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 RAB39BQ96DA2 213 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 MED30Q96HR3 178 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 GAFA1Q96PS6 74 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 OR8B2Q96RD0 313 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 DNTTIP1Q9H147 329 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 PPA2Q9H2U2 334 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 PLEKHJ1Q9NW61 149 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 AK3Q9UIJ7 227 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 ZNF222Q9UK12 451 aa9.12□□□□□ -0.95
TOP3A-216ENST00000583804 TRAV39A0A0B4J263 110 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 CENPXA8MT69 81 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 H7C1Q1 480 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 DVL1O14640 695 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 SMAD7O15105 426 aaKnown RBP9.11□□□□□ -0.95
TOP3A-216ENST00000583804 CTDSPLO15194 276 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 ORC5O43913 435 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 PDCD6O75340 191 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 OR2H2O95918 312 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 IGHV2-5P01817 119 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 CHATP28329 748 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 SLC6A1P30531 599 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 IL2RGP31785 369 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 GNG2P59768 71 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 LMO4P61968 165 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 PITPNAQ00169 270 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 IFITM2Q01629 132 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 LOXL1Q08397 574 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-216ENST00000583804 ATXN7L3Q14CW9 347 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-216ENST00000583804 ZNF260Q3ZCT1 412 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 PAN3Q58A45 887 aaKnown RBP9.11□□□□□ -0.95
TOP3A-216ENST00000583804 LRRC10Q5BKY1 277 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 Q6P435 159 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 TRAPPC6BQ86SZ2 158 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 FGFRL1Q8N441 504 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 ZNF561Q8N587 486 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 SUMF2Q8NBJ7 301 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 ZNRF1Q8ND25 227 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 SDSLQ96GA7 329 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 C7orf50Q9BRJ6 194 aaKnown RBP9.11□□□□□ -0.95
TOP3A-216ENST00000583804 KAAG1Q9UBP8 84 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms