RNA–Protein interactions for RNA: ENST00000582653.1

SHMT1-209, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 3

Gene SHMT1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-209ENST00000582653 STMN2Q93045 179 aa16.39■□□□□ 0.21
SHMT1-209ENST00000582653 R3HDM4Q96D70 268 aa16.39■□□□□ 0.21
SHMT1-209ENST00000582653 OR4F4Q96R69 305 aa16.39■□□□□ 0.21
SHMT1-209ENST00000582653 FAM192AQ9GZU8 254 aa16.39■□□□□ 0.21
SHMT1-209ENST00000582653 TRAV24A0A0B4J272 114 aa16.38■□□□□ 0.21
SHMT1-209ENST00000582653 ZNF729A6NN14 1252 aaPredicted RBP16.38■□□□□ 0.21
SHMT1-209ENST00000582653 TOR1AO14656 332 aa16.38■□□□□ 0.21
SHMT1-209ENST00000582653 ALDOBP05062 364 aa16.38■□□□□ 0.21
SHMT1-209ENST00000582653 NFYBP25208 207 aa16.38■□□□□ 0.21
SHMT1-209ENST00000582653 PIGYQ3MUY2 71 aa16.38■□□□□ 0.21
SHMT1-209ENST00000582653 PAN3Q58A45 887 aaKnown RBP16.38■□□□□ 0.21
SHMT1-209ENST00000582653 OXLD1Q5BKU9 147 aa16.38■□□□□ 0.21
SHMT1-209ENST00000582653 RPL22L1Q6P5R6 122 aaKnown RBP16.38■□□□□ 0.21
SHMT1-209ENST00000582653 OR51T1Q8NGJ9 327 aa16.38■□□□□ 0.21
SHMT1-209ENST00000582653 GPR148Q8TDV2 347 aa16.38■□□□□ 0.21
SHMT1-209ENST00000582653 ORAI1Q96D31 301 aa16.38■□□□□ 0.21
SHMT1-209ENST00000582653 ZNF581Q9P0T4 197 aa16.38■□□□□ 0.21
SHMT1-209ENST00000582653 KIF25Q9UIL4 384 aa16.38■□□□□ 0.21
SHMT1-209ENST00000582653 KIAA2026Q5HYC2 2103 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 LEUTXA8MZ59 168 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 BUB1B-PAK6H3BSN5 160 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 CDRT1O95170 752 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 LALBAP00709 142 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 IGHV3-7P01780 117 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 CGB3P0DN86 165 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 CGB7P0DN87 165 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 DCKP27707 260 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 CD34P28906 385 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 BRS3P32247 399 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 VDAC2P45880 294 aaPredicted RBP16.37■□□□□ 0.21
SHMT1-209ENST00000582653 OR3A4PP47883 348 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 RBM39Q14498 530 aaKnown RBP16.37■□□□□ 0.21
SHMT1-209ENST00000582653 HLA-DRB5Q30154 266 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 CCDC58Q4VC31 144 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 C16orf82Q7Z2V1 217 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 OR13A1Q8NGR1 328 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 HAVCR2Q8TDQ0 301 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 TMEM106AQ96A25 262 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 RDH12Q96NR8 316 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 OR6C3Q9NZP0 311 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 CLEC2DQ9UHP7 191 aa16.37■□□□□ 0.21
SHMT1-209ENST00000582653 MEIKINA0A087WXM9 373 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 KBTBD11-OT1A0A1B0GTJ5 212 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 HTR3BO95264 441 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 GLP1RP43220 463 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 CD83Q01151 205 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 RSU1Q15404 277 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 TPTE2P1Q5T6R2 138 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 ASCL4Q6XD76 172 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 TMPRSS11AQ6ZMR5 421 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 OR5AU1Q8NGC0 362 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 OR13C5Q8NGS8 318 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 PLPPR1Q8TBJ4 325 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 CYGBQ8WWM9 190 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 LEAP2Q969E1 77 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 CPNE2Q96FN4 548 aaPredicted RBP16.36■□□□□ 0.21
SHMT1-209ENST00000582653 KIRREL1Q96J84 757 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 LIN7BQ9HAP6 207 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 BABAM2Q9NXR7 383 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 ING4Q9UNL4 249 aa16.36■□□□□ 0.21
SHMT1-209ENST00000582653 A0A087X0M5 115 aa16.35■□□□□ 0.21
SHMT1-209ENST00000582653 TRAV39A0A0B4J263 110 aa16.35■□□□□ 0.21
SHMT1-209ENST00000582653 A0A1B0GX30 115 aa16.35■□□□□ 0.21
SHMT1-209ENST00000582653 LY6LH3BQJ8 138 aa16.35■□□□□ 0.21
SHMT1-209ENST00000582653 OGG1O15527 345 aa16.35■□□□□ 0.21
SHMT1-209ENST00000582653 PRB2P02812 416 aaPredicted RBP16.35■□□□□ 0.21
SHMT1-209ENST00000582653 CD2P06729 351 aa16.35■□□□□ 0.21
SHMT1-209ENST00000582653 PRRX1P54821 245 aa16.35■□□□□ 0.21
SHMT1-209ENST00000582653 LTC4SQ16873 150 aa16.35■□□□□ 0.21
SHMT1-209ENST00000582653 Q6ZPA2 131 aa16.35■□□□□ 0.21
SHMT1-209ENST00000582653 ZNF565Q8N9K5 539 aa16.35■□□□□ 0.21
SHMT1-209ENST00000582653 WFDC9Q8NEX5 89 aa16.35■□□□□ 0.21
SHMT1-209ENST00000582653 Q8NFD4 153 aa16.35■□□□□ 0.21
SHMT1-209ENST00000582653 CREB3L1Q96BA8 519 aa16.35■□□□□ 0.21
SHMT1-209ENST00000582653 AKR1E2Q96JD6 320 aa16.35■□□□□ 0.21
SHMT1-209ENST00000582653 BARHL1Q9BZE3 327 aa16.35■□□□□ 0.21
SHMT1-209ENST00000582653 CALYQ9NYX4 217 aa16.35■□□□□ 0.21
SHMT1-209ENST00000582653 DIMT1Q9UNQ2 313 aaKnown RBP16.35■□□□□ 0.21
SHMT1-209ENST00000582653 SH2D7A6NKC9 451 aaPredicted RBP16.34■□□□□ 0.21
SHMT1-209ENST00000582653 CEACAM3P40198 252 aa16.34■□□□□ 0.21
SHMT1-209ENST00000582653 IL13RA2Q14627 380 aa16.34■□□□□ 0.21
SHMT1-209ENST00000582653 RSBN1Q5VWQ0 802 aaPredicted RBP16.34■□□□□ 0.21
SHMT1-209ENST00000582653 CENPVQ7Z7K6 275 aaPredicted RBP16.34■□□□□ 0.21
SHMT1-209ENST00000582653 RFESDQ8TAC1 157 aa16.34■□□□□ 0.21
SHMT1-209ENST00000582653 MRGPRDQ8TDS7 321 aa16.34■□□□□ 0.21
SHMT1-209ENST00000582653 SLC25A33Q9BSK2 321 aa16.34■□□□□ 0.21
SHMT1-209ENST00000582653 TMEM138Q9NPI0 162 aa16.34■□□□□ 0.21
SHMT1-209ENST00000582653 ZNF281Q9Y2X9 895 aa16.34■□□□□ 0.21
SHMT1-209ENST00000582653 LPLP06858 475 aa16.33■□□□□ 0.2
SHMT1-209ENST00000582653 C21orf33P30042 268 aaPredicted RBP16.33■□□□□ 0.2
SHMT1-209ENST00000582653 ZNF93P35789 620 aaPredicted RBP16.33■□□□□ 0.2
SHMT1-209ENST00000582653 ARHGDIBP52566 201 aa16.33■□□□□ 0.2
SHMT1-209ENST00000582653 ABCA11PQ4W5N1 156 aa16.33■□□□□ 0.2
SHMT1-209ENST00000582653 DDI2Q5TDH0 399 aa16.33■□□□□ 0.2
SHMT1-209ENST00000582653 ZFP41Q8N8Y5 198 aa16.33■□□□□ 0.2
SHMT1-209ENST00000582653 OR9G1Q8NH87 305 aa16.33■□□□□ 0.2
SHMT1-209ENST00000582653 GHSRQ92847 366 aa16.33■□□□□ 0.2
SHMT1-209ENST00000582653 SMIM19Q96E16 107 aa16.33■□□□□ 0.2
SHMT1-209ENST00000582653 TMEM80Q96HE8 168 aa16.33■□□□□ 0.2
SHMT1-209ENST00000582653 RBM14Q96PK6 669 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms