RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 TAS2R60P59551 318 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 RPS18P62269 152 aaKnown RBP8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 TLE4Q04727 773 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 HNF4GQ14541 408 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 SSX2Q16385 188 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 ZNF818PQ6ZRF7 136 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 ADPRHL1Q8NDY3 354 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 SNIP1Q8TAD8 396 aaKnown RBP8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 CLEC1BQ9P126 229 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 CA14Q9ULX7 337 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 ZNF705GA8MUZ8 300 aaPredicted RBP8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 ZNF732B4DXR9 585 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 C10orf142B7Z368 130 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 NPIPA2E9PIF3 369 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 NPIPA3F8WFD2 350 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 DHHO43323 396 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 TIAF1O95411 115 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 CDS2O95674 445 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 CD55P08174 381 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 MALLQ13021 153 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 SLC25A53Q5H9E4 307 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 FAM90A2PQ658T7 463 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 GAPTQ8N292 157 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 M1APQ8TC57 530 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 PIGCQ92535 297 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 GNPNAT1Q96EK6 184 aaPredicted RBP8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 ULBP2Q9BZM5 246 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 MTIF3Q9H2K0 278 aaKnown RBP8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 LRFN1Q9P244 771 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 CEP290O15078 2479 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 NRASP01111 189 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 SPINK2P20155 84 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 MSX1P28360 303 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 NPBWR2P48146 333 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 EIF3IQ13347 325 aaKnown RBP8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 COL19A1Q14993 1142 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 CNN3Q15417 329 aaKnown RBP8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 RNASE11Q8TAA1 199 aaKnown RBP8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 SPSB1Q96BD6 273 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 CABLES2Q9BTV7 478 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 CHRNA10Q9GZZ6 450 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 GAB2Q9UQC2 676 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 MTCH2Q9Y6C9 303 aa8.25□□□□□ -1.09
PPP4R1-222ENST00000582594 KIAA2026Q5HYC2 2103 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 TMEM265A0A087WTH1 108 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 IGKV1D-13A0A0B4J2D9 117 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 CLDN34H7C241 214 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 ETV2O00321 342 aaPredicted RBP8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 SCTP09683 121 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 IGKV1-13P0DP09 117 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 APLNRP35414 380 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 UCP3P55916 312 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 MRPS34P82930 218 aaKnown RBP8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 ZNF124Q15973 351 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 SSX7Q7RTT5 188 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 TGIF2LXQ8IUE1 241 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 PLXDC1Q8IUK5 500 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 OR8G5Q8NG78 346 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 OR13D1Q8NGV5 346 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 RBMXL1Q96E39 390 aaKnown RBP8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 SIGLEC12Q96PQ1 595 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 CCL28Q9NRJ3 127 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 MYOTQ9UBF9 498 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 C9J4A7 227 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 DUX1O43812 170 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 PDCD6O75340 191 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 HBE1P02100 147 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 TCN2P20062 427 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 OTX1P32242 354 aaPredicted RBP8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 PLCXD3Q63HM9 321 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 SP5Q6BEB4 398 aaPredicted RBP8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 ZNF787Q6DD87 383 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 C17orf82Q86X59 251 aaPredicted RBP8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 OR4X1Q8NH49 305 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 PLPPR1Q8TBJ4 325 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 CA5BP1Q8WTZ4 195 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 ATP5SQ99766 215 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 SPIN2AQ99865 258 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 SPIN2BQ9BPZ2 258 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 ZNF407Q9C0G0 2248 aa8.24□□□□□ -1.09
PPP4R1-222ENST00000582594 A0A0G2JRQ6 117 aa8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 A0A1B0GU03 582 aa8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 CEBPZOSA8MTT3 80 aa8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 LMO7DNF2Z398 122 aa8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 CELA2AP08217 269 aa8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 TAS2R30P59541 319 aa8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 ZFP36L1Q07352 338 aaKnown RBP8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 CLN3Q13286 438 aa8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 ZNF468Q5VIY5 522 aaPredicted RBP8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 RAET1LQ5VY80 246 aa8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 CALHM1Q8IU99 346 aa8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 TMEM54Q969K7 222 aa8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 CDCA3Q99618 268 aaPredicted RBP8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 GPR87Q9BY21 358 aa8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 RPRMQ9NS64 109 aa8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 A0A1W2PR77 199 aa8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 CYB5R3P00387 301 aaPredicted RBP8.23□□□□□ -1.09
PPP4R1-222ENST00000582594 PAX9P55771 341 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms