RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 PLPPR1Q8TBJ4 325 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 PHF21AQ96BD5 680 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 COQ2Q96H96 371 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 OR8B2Q96RD0 313 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 REG4Q9BYZ8 158 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 FAM234AQ9H0X4 552 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 AUNIPQ9H7T9 357 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.91□□□□□ -1.14
RFFL-210ENST00000582308 EXTL2Q9UBQ6 330 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 SLC25A10Q9UBX3 287 aaPredicted RBP7.91□□□□□ -1.14
RFFL-210ENST00000582308 AK3Q9UIJ7 227 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 ADAM30Q9UKF2 790 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 ACANP16112 2415 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 OTOGQ6ZRI0 2925 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 A0A0G2JMP0 313 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 A0A0X1KG70 313 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 TMEM235A6NFC5 223 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 CYSRT1A8MQ03 144 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 RNF223E7ERA6 249 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 MGST3O14880 152 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 PHF1O43189 567 aaPredicted RBP7.9□□□□□ -1.14
RFFL-210ENST00000582308 CSN2P05814 226 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 MELTFP08582 738 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 GSTP1P09211 210 aaKnown RBP7.9□□□□□ -1.14
RFFL-210ENST00000582308 NDUFB7P17568 137 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 GLIPR1P48060 266 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 PAX5Q02548 391 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 AESQ08117 197 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 RBM39Q14498 530 aaKnown RBP7.9□□□□□ -1.14
RFFL-210ENST00000582308 ATXN7L3Q14CW9 347 aaPredicted RBP7.9□□□□□ -1.14
RFFL-210ENST00000582308 LRRC10Q5BKY1 277 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 RSBN1Q5VWQ0 802 aaPredicted RBP7.9□□□□□ -1.14
RFFL-210ENST00000582308 ZNF497Q6ZNH5 498 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 NLRC3Q7RTR2 1065 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 OR4M2Q8NGB6 313 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 OR5D13Q8NGL4 314 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 PPP1R35Q8TAP8 253 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 NEK7Q8TDX7 302 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 ABHD1Q96SE0 405 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 HDHD3Q9BSH5 251 aaPredicted RBP7.9□□□□□ -1.14
RFFL-210ENST00000582308 ING3Q9NXR8 418 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 ETAA1Q9NY74 926 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 ITGB1BP2Q9UKP3 347 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 MRPS7Q9Y2R9 242 aaKnown RBP7.9□□□□□ -1.14
RFFL-210ENST00000582308 CELSR1Q9NYQ6 3014 aa7.9□□□□□ -1.14
RFFL-210ENST00000582308 CSPG4Q6UVK1 2322 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 ZNF469Q96JG9 3925 aaPredicted RBP7.89□□□□□ -1.15
RFFL-210ENST00000582308 MEIOCA2RUB1 952 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 FABP12A6NFH5 140 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 SERPINE3A8MV23 424 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 KIAA1324LA8MWY0 1029 aaPredicted RBP7.89□□□□□ -1.15
RFFL-210ENST00000582308 FAM157AC9JC47 383 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 SSX5O60225 188 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 TPPPO94811 219 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 NAPSAO96009 420 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 MT-ND4P03905 459 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 ZFP36P26651 326 aaKnown RBP7.89□□□□□ -1.15
RFFL-210ENST00000582308 ERP29P30040 261 aaKnown RBP7.89□□□□□ -1.15
RFFL-210ENST00000582308 TALDO1P37837 337 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 ETV6P41212 452 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 MNDAP41218 407 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 KCNJ3P48549 501 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 NPY4RP50391 375 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 P2RX3P56373 397 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 LOXL1Q08397 574 aaPredicted RBP7.89□□□□□ -1.15
RFFL-210ENST00000582308 EDDM3AQ14507 147 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 PNLIPRP3Q17RR3 467 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 KRBOX4Q5JUW0 171 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 HACD4Q5VWC8 232 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 SLC35E4Q6ICL7 350 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 Q6ZPA2 131 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 LINC00299Q6ZSB3 139 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 BTN2A1Q7KYR7 527 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 GDPD3Q7L5L3 318 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 SNX29P2Q8IUI4 249 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 GAPTQ8N292 157 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 MFSD4AQ8N468 514 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 TPRX1Q8N7U7 411 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 MAPK1IP1LQ8NDC0 245 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 GCDHQ92947 438 aaPredicted RBP7.89□□□□□ -1.15
RFFL-210ENST00000582308 RAB39BQ96DA2 213 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 DCTN5Q9BTE1 182 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 SSBP3Q9BWW4 388 aaPredicted RBP7.89□□□□□ -1.15
RFFL-210ENST00000582308 AKIP1Q9NQ31 210 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 C19orf12Q9NSK7 152 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 CLN8Q9UBY8 286 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 KIF25Q9UIL4 384 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 V9GYH0 126 aa7.89□□□□□ -1.15
RFFL-210ENST00000582308 TLN2Q9Y4G6 2542 aa7.88□□□□□ -1.15
RFFL-210ENST00000582308 TRAV39A0A0B4J263 110 aa7.88□□□□□ -1.15
RFFL-210ENST00000582308 TMEM30CPA0ZSE6 113 aa7.88□□□□□ -1.15
RFFL-210ENST00000582308 ODAMA1E959 279 aa7.88□□□□□ -1.15
RFFL-210ENST00000582308 MEX3AA1L020 520 aaKnown RBP7.88□□□□□ -1.15
RFFL-210ENST00000582308 C22orf46C9J442 243 aa7.88□□□□□ -1.15
RFFL-210ENST00000582308 GPR37O15354 613 aa7.88□□□□□ -1.15
RFFL-210ENST00000582308 CA11O75493 328 aa7.88□□□□□ -1.15
RFFL-210ENST00000582308 CD3GP09693 182 aa7.88□□□□□ -1.15
RFFL-210ENST00000582308 EDDM3BP56851 147 aa7.88□□□□□ -1.15
RFFL-210ENST00000582308 GNB2P62879 340 aa7.88□□□□□ -1.15
RFFL-210ENST00000582308 LCN2P80188 198 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms