RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 IFT22Q9H7X7 185 aa16.34■□□□□ 0.21
SS18-218ENST00000581021 ACOT13Q9NPJ3 140 aa16.34■□□□□ 0.21
SS18-218ENST00000581021 UBE2J1Q9Y385 318 aaPredicted RBP16.34■□□□□ 0.21
SS18-218ENST00000581021 hCG_1809904A0A1W2PP81 198 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 A0A1W2PPE2 198 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 A0A1W2PR64 198 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 A0A1W2PRV1 198 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 RSBN1Q5VWQ0 802 aaPredicted RBP16.33■□□□□ 0.2
SS18-218ENST00000581021 AWAT2Q6E213 333 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 CDH26Q8IXH8 852 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 NKAIN3Q8N8D7 197 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 SUMF2Q8NBJ7 301 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 BEND2Q8NDZ0 799 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 OR11H6Q8NGC7 330 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 THRSPQ92748 146 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 CORO2AQ92828 525 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 GFI1Q99684 422 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 KIF25Q9UIL4 384 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 BLOC1S6Q9UL45 172 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 SESN1Q9Y6P5 492 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 KIAA2026Q5HYC2 2103 aa16.33■□□□□ 0.2
SS18-218ENST00000581021 TRGV10A0A0A0MS01 117 aa16.32■□□□□ 0.2
SS18-218ENST00000581021 FAM90A8PA6NJQ4 464 aa16.32■□□□□ 0.2
SS18-218ENST00000581021 OR7C1O76099 320 aaPredicted RBP16.32■□□□□ 0.2
SS18-218ENST00000581021 CSTBP04080 98 aaKnown RBP16.32■□□□□ 0.2
SS18-218ENST00000581021 OMGP23515 440 aa16.32■□□□□ 0.2
SS18-218ENST00000581021 GABARAPL2P60520 117 aa16.32■□□□□ 0.2
SS18-218ENST00000581021 FABP5Q01469 135 aa16.32■□□□□ 0.2
SS18-218ENST00000581021 EMX1Q04741 257 aaPredicted RBP16.32■□□□□ 0.2
SS18-218ENST00000581021 C17orf58Q2M2W7 97 aa16.32■□□□□ 0.2
SS18-218ENST00000581021 ZNF626Q68DY1 528 aa16.32■□□□□ 0.2
SS18-218ENST00000581021 BRICD5Q6PL45 260 aa16.32■□□□□ 0.2
SS18-218ENST00000581021 ZNF367Q7RTV3 350 aa16.32■□□□□ 0.2
SS18-218ENST00000581021 OR13A1Q8NGR1 328 aa16.32■□□□□ 0.2
SS18-218ENST00000581021 PHYHIPQ92561 330 aa16.32■□□□□ 0.2
SS18-218ENST00000581021 DPCDQ9BVM2 203 aaPredicted RBP16.32■□□□□ 0.2
SS18-218ENST00000581021 BANF2Q9H503 90 aa16.32■□□□□ 0.2
SS18-218ENST00000581021 TRAV39A0A0B4J263 110 aa16.31■□□□□ 0.2
SS18-218ENST00000581021 GPR137BO60478 399 aa16.31■□□□□ 0.2
SS18-218ENST00000581021 PAHP00439 452 aa16.31■□□□□ 0.2
SS18-218ENST00000581021 CGB3P0DN86 165 aa16.31■□□□□ 0.2
SS18-218ENST00000581021 CGB7P0DN87 165 aa16.31■□□□□ 0.2
SS18-218ENST00000581021 CD37P11049 281 aa16.31■□□□□ 0.2
SS18-218ENST00000581021 GTF2F2P13984 249 aa16.31■□□□□ 0.2
SS18-218ENST00000581021 PAX5Q02548 391 aa16.31■□□□□ 0.2
SS18-218ENST00000581021 HSD17B12Q53GQ0 312 aa16.31■□□□□ 0.2
SS18-218ENST00000581021 C12orf54Q6X4T0 127 aa16.31■□□□□ 0.2
SS18-218ENST00000581021 S100A13Q99584 98 aa16.31■□□□□ 0.2
SS18-218ENST00000581021 UQCC2Q9BRT2 126 aa16.31■□□□□ 0.2
SS18-218ENST00000581021 TMEM133Q9H2Q1 129 aa16.31■□□□□ 0.2
SS18-218ENST00000581021 KCNK15Q9H427 330 aa16.31■□□□□ 0.2
SS18-218ENST00000581021 TCF7L1Q9HCS4 588 aa16.31■□□□□ 0.2
SS18-218ENST00000581021 C1RLQ9NZP8 487 aa16.31■□□□□ 0.2
SS18-218ENST00000581021 IGHV2-26A0A0B4J1V2 119 aa16.3■□□□□ 0.2
SS18-218ENST00000581021 MEGF11A6BM72 1044 aa16.3■□□□□ 0.2
SS18-218ENST00000581021 FAM172BPA6NC97 362 aa16.3■□□□□ 0.2
SS18-218ENST00000581021 ZNF780AO75290 641 aaPredicted RBP16.3■□□□□ 0.2
SS18-218ENST00000581021 ARG1P05089 322 aa16.3■□□□□ 0.2
SS18-218ENST00000581021 JUNBP17275 347 aaPredicted RBP16.3■□□□□ 0.2
SS18-218ENST00000581021 SRMP19623 302 aa16.3■□□□□ 0.2
SS18-218ENST00000581021 CDK2P24941 298 aa16.3■□□□□ 0.2
SS18-218ENST00000581021 HEPN1Q6WQI6 88 aa16.3■□□□□ 0.2
SS18-218ENST00000581021 OR13D1Q8NGV5 346 aa16.3■□□□□ 0.2
SS18-218ENST00000581021 FOXRED1Q96CU9 486 aaPredicted RBP16.3■□□□□ 0.2
SS18-218ENST00000581021 MEGF9Q9H1U4 602 aa16.3■□□□□ 0.2
SS18-218ENST00000581021 TAS2R3Q9NYW6 316 aa16.3■□□□□ 0.2
SS18-218ENST00000581021 RCC2Q9P258 522 aaKnown RBP16.3■□□□□ 0.2
SS18-218ENST00000581021 VPREB3Q9UKI3 123 aa16.3■□□□□ 0.2
SS18-218ENST00000581021 MEIKINA0A087WXM9 373 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 FUOMA2VDF0 154 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 MGMTP16455 207 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 MDKP21741 143 aaPredicted RBP16.29■□□□□ 0.2
SS18-218ENST00000581021 CFPP27918 469 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 GLP1RP43220 463 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 MPV17LQ2QL34 196 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 C1orf100Q5SVJ3 147 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 SIGIRRQ6IA17 410 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 OR10K2Q6IF99 312 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 LINC00596Q86U02 117 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 SPARTQ8N0X7 666 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 PIFOQ8TCI5 191 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 FAM46BQ96A09 425 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 Q96M66 194 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 DPAGT1Q9H3H5 408 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 GAL3ST2Q9H3Q3 398 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 Q9H521 79 aa16.29■□□□□ 0.2
SS18-218ENST00000581021 H3BUX3 64 aa16.28■□□□□ 0.2
SS18-218ENST00000581021 CRTAPO75718 401 aaPredicted RBP16.28■□□□□ 0.2
SS18-218ENST00000581021 GABRA5P31644 462 aa16.28■□□□□ 0.2
SS18-218ENST00000581021 GPR176Q14439 515 aa16.28■□□□□ 0.2
SS18-218ENST00000581021 ATAD3CQ5T2N8 411 aa16.28■□□□□ 0.2
SS18-218ENST00000581021 OR4P4Q8NGL7 312 aa16.28■□□□□ 0.2
SS18-218ENST00000581021 MRGPRDQ8TDS7 321 aa16.28■□□□□ 0.2
SS18-218ENST00000581021 DYRK2Q92630 601 aa16.28■□□□□ 0.2
SS18-218ENST00000581021 SSX3Q99909 188 aa16.28■□□□□ 0.2
SS18-218ENST00000581021 SELENOIQ9C0D9 397 aa16.28■□□□□ 0.2
SS18-218ENST00000581021 NCOR1P1Q9H4R4 102 aa16.28■□□□□ 0.2
SS18-218ENST00000581021 ZNF286AQ9HBT8 521 aa16.28■□□□□ 0.2
SS18-218ENST00000581021 OR6C3Q9NZP0 311 aa16.28■□□□□ 0.2
SS18-218ENST00000581021 FBN3Q75N90 2809 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms