RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 ZNF175Q9Y473 711 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 TECTAO75443 2155 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 A0A1W2PNU3 283 aaPredicted RBP9.62□□□□□ -0.87
RPAIN-212ENST00000573126 C19orf67A6NJJ6 358 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 HSD17B6O14756 317 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 TNFSF12O43508 249 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 LILRA1O75019 489 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 RAB13P51153 203 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 FGF12P61328 243 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 EWSR1Q01844 656 aaKnown RBP eCLIP9.62□□□□□ -0.87
RPAIN-212ENST00000573126 IGFBP7Q16270 282 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 NRN1LQ496H8 165 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 TMEM182Q6ZP80 229 aaPredicted RBP9.62□□□□□ -0.87
RPAIN-212ENST00000573126 LINC00518Q8N0U6 118 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 ZNF565Q8N9K5 539 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 BOD1Q96IK1 185 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 TAAR9Q96RI9 348 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 GINS3Q9BRX5 216 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 TTTY12Q9BZ98 90 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 Q9N2K0 584 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 B4GALT7Q9UBV7 327 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 POMT1Q9Y6A1 747 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 MED13Q9UHV7 2174 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 SSSCA1O60232 199 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 SYNGR4O95473 234 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 NAPSAO96009 420 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 GUK1Q16774 197 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 CEACAM21Q3KPI0 293 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 CXorf66Q5JRM2 361 aaPredicted RBP9.62□□□□□ -0.87
RPAIN-212ENST00000573126 VASH2Q86V25 355 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 C20orf24Q9BUV8 137 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 STRADBQ9C0K7 418 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 FAM86C1Q9NVL1 165 aa9.62□□□□□ -0.87
RPAIN-212ENST00000573126 IGKV1-6A0A0C4DH72 117 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 SLC22A20A6NK97 555 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 TRDCB7Z8K6 153 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 TRAPPC2LH3BP13 241 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 HS3ST1O14792 307 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 ADAM20O43506 726 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 NKX2-1P43699 371 aaPredicted RBP9.61□□□□□ -0.87
RPAIN-212ENST00000573126 KCNJ3P48549 501 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 C17orf78Q8N4C9 275 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 OR2C3Q8N628 320 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 Q8NFD4 153 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 RDH5Q92781 318 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 APOBEC3DQ96AK3 386 aaPredicted RBP9.61□□□□□ -0.87
RPAIN-212ENST00000573126 APH1AQ96BI3 265 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 CLCC1Q96S66 551 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 LINC00470Q9BZP3 86 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 ARRDC1-AS1Q9H2J1 176 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 CCL28Q9NRJ3 127 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 C19orf12Q9NSK7 152 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 FBXO7Q9Y3I1 522 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 CFAP47Q6ZTR5 3102 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 IGSF23A1L1A6 192 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 HEXAP06865 529 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 TGIF1Q15583 401 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 AVPI1Q5T686 147 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 C20orf204Q6ZNR8 217 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 TMEM251Q8N6I4 163 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 FAM213BQ8TBF2 198 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 C14orf79Q96F83 325 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 C12orf49Q9H741 205 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 RPS10P5Q9NQ39 176 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 PLSCR2Q9NRY7 297 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 ATPIF1Q9UII2 106 aa9.61□□□□□ -0.87
RPAIN-212ENST00000573126 CD300LBA8K4G0 201 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 CDS2O95674 445 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 PPP1CCP36873 323 aaKnown RBP9.6□□□□□ -0.87
RPAIN-212ENST00000573126 PLGLB1Q02325 96 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 DCAF10Q5QP82 559 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 NUFIP2Q7Z417 695 aaKnown RBP9.6□□□□□ -0.87
RPAIN-212ENST00000573126 MKXQ8IYA7 352 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 TMEM217Q8N7C4 229 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 LILRB1Q8NHL6 650 aaPredicted RBP9.6□□□□□ -0.87
RPAIN-212ENST00000573126 TMEM171Q8WVE6 324 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 IP6K3Q96PC2 410 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 SCRT1Q9BWW7 348 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 SPRY4Q9C004 299 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 SPACA1Q9HBV2 294 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 KPTNQ9Y664 436 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 COLCA2A8K830 154 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 LINC01387J3KSC0 135 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 CST7O76096 145 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 SNRNP70P08621 437 aaKnown RBP9.6□□□□□ -0.87
RPAIN-212ENST00000573126 DAOP14920 347 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 MPLP40238 635 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 PMELP40967 661 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 SRPXP78539 464 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 HIKESHIQ53FT3 197 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 AWAT1Q58HT5 328 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 SPATA46Q5T0L3 261 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 SELENOHQ8IZQ5 122 aaKnown RBP9.6□□□□□ -0.87
RPAIN-212ENST00000573126 FAM185AQ8N0U4 392 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 ISOC2Q96AB3 205 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 POM121L2Q96KW2 1035 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 ZPBPQ9BS86 351 aa9.6□□□□□ -0.87
RPAIN-212ENST00000573126 ESRP2Q9H6T0 727 aaKnown RBP9.6□□□□□ -0.87
RPAIN-212ENST00000573126 LNP1A1A4G5 178 aa9.59□□□□□ -0.87
RPAIN-212ENST00000573126 FAM90A10PA6NDY2 464 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms