RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 IGSF23A1L1A6 192 aa9.52□□□□□ -0.89
PALB2-206ENST00000568219 DHRS3O75911 302 aa9.52□□□□□ -0.89
PALB2-206ENST00000568219 PPYP01298 95 aa9.52□□□□□ -0.89
PALB2-206ENST00000568219 CRYAAP02489 173 aa9.52□□□□□ -0.89
PALB2-206ENST00000568219 B4GALT1P15291 398 aa9.52□□□□□ -0.89
PALB2-206ENST00000568219 OR5AS1Q8N127 324 aa9.52□□□□□ -0.89
PALB2-206ENST00000568219 OR5L2Q8NGL0 311 aa9.52□□□□□ -0.89
PALB2-206ENST00000568219 TMEM204Q9BSN7 226 aa9.52□□□□□ -0.89
PALB2-206ENST00000568219 TRAPPC2LH3BP13 241 aa9.52□□□□□ -0.89
PALB2-206ENST00000568219 TNFRSF10CO14798 259 aa9.52□□□□□ -0.89
PALB2-206ENST00000568219 KITLGP21583 273 aa9.52□□□□□ -0.89
PALB2-206ENST00000568219 PTTG1IPP53801 180 aa9.52□□□□□ -0.89
PALB2-206ENST00000568219 TAS2R30P59541 319 aa9.52□□□□□ -0.89
PALB2-206ENST00000568219 YPEL5P62699 121 aa9.52□□□□□ -0.89
PALB2-206ENST00000568219 RNF166Q96A37 237 aaPredicted RBP9.52□□□□□ -0.89
PALB2-206ENST00000568219 NOL4LQ96MY1 436 aaPredicted RBP9.52□□□□□ -0.89
PALB2-206ENST00000568219 IL23AQ9NPF7 189 aa9.52□□□□□ -0.89
PALB2-206ENST00000568219 CACNG5Q9UF02 275 aa9.52□□□□□ -0.89
PALB2-206ENST00000568219 MTCL1Q9Y4B5 1905 aaKnown RBP9.52□□□□□ -0.89
PALB2-206ENST00000568219 MKI67P46013 3256 aaKnown RBP9.52□□□□□ -0.89
PALB2-206ENST00000568219 ROS1P08922 2347 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 WIPF3A6NGB9 483 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 KRASP01116 189 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 SHBQ15464 509 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 MRPL21Q7Z2W9 205 aaKnown RBP9.51□□□□□ -0.89
PALB2-206ENST00000568219 C9orf40Q8IXQ3 194 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 MAML2Q8IZL2 1156 aaPredicted RBP9.51□□□□□ -0.89
PALB2-206ENST00000568219 ZNF808Q8N4W9 903 aaPredicted RBP9.51□□□□□ -0.89
PALB2-206ENST00000568219 NOXO1Q8NFA2 376 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 TSTD1Q8NFU3 115 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 PP6455Q8WZ26 134 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 EXTL1Q92935 676 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 ALKBH3Q96Q83 286 aaPredicted RBP9.51□□□□□ -0.89
PALB2-206ENST00000568219 TP53RKQ96S44 253 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 ERRFI1Q9UJM3 462 aaPredicted RBP9.51□□□□□ -0.89
PALB2-206ENST00000568219 FOXD3Q9UJU5 478 aaPredicted RBP9.51□□□□□ -0.89
PALB2-206ENST00000568219 TBX21Q9UL17 535 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 LHFPL6Q9Y693 200 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 DENND4AQ7Z401 1863 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 TP53I11O14683 189 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 WNT5AP41221 380 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 ZNF664Q8N3J9 261 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 OR4X1Q8NH49 305 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 HLA-CQ95604 372 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 ADGRG7Q96K78 797 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 FAM234AQ9H0X4 552 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 DUSP15Q9H1R2 295 aaPredicted RBP9.51□□□□□ -0.89
PALB2-206ENST00000568219 RPRMQ9NS64 109 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 CACNA1EQ15878 2313 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 GRIFINA4D1Z8 144 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 CLEC18AA5D8T8 446 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 CYB5R3P00387 301 aaPredicted RBP9.51□□□□□ -0.89
PALB2-206ENST00000568219 RPLP1P05386 114 aaKnown RBP9.51□□□□□ -0.89
PALB2-206ENST00000568219 PMCHP20382 165 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 OTX2P32243 289 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 RPL19P84098 196 aaKnown RBP9.51□□□□□ -0.89
PALB2-206ENST00000568219 HERPUD1Q15011 391 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 C5orf24Q7Z6I8 188 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 SLC35E3Q7Z769 313 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 C7orf61Q8IZ16 206 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 CLEC18CQ8NCF0 446 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 DMBX1Q8NFW5 382 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 TRAPPC2LQ9UL33 140 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 MMACHCQ9Y4U1 282 aa9.51□□□□□ -0.89
PALB2-206ENST00000568219 WDR90Q96KV7 1748 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 ZNF407Q9C0G0 2248 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 LDLRAD4O15165 306 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 HSPB1P04792 205 aaKnown RBP9.5□□□□□ -0.89
PALB2-206ENST00000568219 BCL2P10415 239 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 SRSF4Q08170 494 aaKnown RBP9.5□□□□□ -0.89
PALB2-206ENST00000568219 PNRC1Q12796 327 aaPredicted RBP9.5□□□□□ -0.89
PALB2-206ENST00000568219 P2RY6Q15077 328 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 ZNF774Q6NX45 483 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 DNM1P46Q6ZS02 220 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 ZNF100Q8IYN0 542 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 OR10G3Q8NGC4 313 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 OR10J5Q8NHC4 309 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 GINS3Q9BRX5 216 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 NDUFAF3Q9BU61 184 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 PLA2G2EQ9NZK7 142 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 MYOTQ9UBF9 498 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 RNF24Q9Y225 148 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 HEATR1Q9H583 2144 aaKnown RBP9.5□□□□□ -0.89
PALB2-206ENST00000568219 H0Y8G0 127 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 EREGO14944 169 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 SIAH2O43255 324 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 TFPI2P48307 235 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 TNFRSF9Q07011 255 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 SPEM2Q0P670 501 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 OR1N1Q8NGS0 311 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 ABHD5Q8WTS1 349 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 PLPPR2Q96GM1 343 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 SHDQ96IW2 340 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 THBS4P35443 961 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 OR3A1P47881 315 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 TMEM187Q14656 261 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 VAMP3Q15836 100 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 HLA-BQ31612 363 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 PDLIM3Q53GG5 364 aaPredicted RBP9.5□□□□□ -0.89
PALB2-206ENST00000568219 PLXDC1Q8IUK5 500 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms