RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 SLC22A6Q4U2R8 563 aa13.5□□□□□ -0.25
CDT1-202ENST00000562747 MIDNQ504T8 468 aa13.5□□□□□ -0.25
CDT1-202ENST00000562747 PAN3Q58A45 887 aaKnown RBP13.5□□□□□ -0.25
CDT1-202ENST00000562747 FAM27D1Q5T7N8 215 aa13.5□□□□□ -0.25
CDT1-202ENST00000562747 AWAT2Q6E213 333 aa13.5□□□□□ -0.25
CDT1-202ENST00000562747 GLIPR1L1Q6UWM5 242 aa13.5□□□□□ -0.25
CDT1-202ENST00000562747 CORO2AQ92828 525 aa13.5□□□□□ -0.25
CDT1-202ENST00000562747 TMEM203Q969S6 136 aa13.5□□□□□ -0.25
CDT1-202ENST00000562747 FOXRED1Q96CU9 486 aaPredicted RBP13.5□□□□□ -0.25
CDT1-202ENST00000562747 MRPS24Q96EL2 167 aaKnown RBP13.5□□□□□ -0.25
CDT1-202ENST00000562747 GHRLQ9UBU3 117 aa13.5□□□□□ -0.25
CDT1-202ENST00000562747 POMT1Q9Y6A1 747 aa13.5□□□□□ -0.25
CDT1-202ENST00000562747 TRGV10A0A0A0MS01 117 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 A0A1W2PRD5 423 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 A0A1W2PRF3 423 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 A0A1W2PRM7 423 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 MEIOCA2RUB1 952 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 IGHV1-8P0DP01 117 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 MDKP21741 143 aaPredicted RBP13.49□□□□□ -0.25
CDT1-202ENST00000562747 GABRA5P31644 462 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 SAA4P35542 130 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 GLIPR1P48060 266 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 RPS25P62851 125 aaKnown RBP13.49□□□□□ -0.25
CDT1-202ENST00000562747 PAX5Q02548 391 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 AESQ08117 197 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 KRBOX4Q5JUW0 171 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 GLT8D1Q68CQ7 371 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 TMEM91Q6ZNR0 172 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 TRAPPC6BQ86SZ2 158 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 LRRTM1Q86UE6 522 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 OR4D6Q8NGJ1 314 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 SSMEM1Q8WWF3 244 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 COQ2Q96H96 371 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 SLITRK2Q9H156 845 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 GAL3ST2Q9H3Q3 398 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 NCOR1P1Q9H4R4 102 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 TAS2R3Q9NYW6 316 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 LRRC42Q9Y546 428 aa13.49□□□□□ -0.25
CDT1-202ENST00000562747 ODAMA1E959 279 aa13.48□□□□□ -0.25
CDT1-202ENST00000562747 MEX3AA1L020 520 aaKnown RBP13.48□□□□□ -0.25
CDT1-202ENST00000562747 GEMIN2O14893 280 aaKnown RBP13.48□□□□□ -0.25
CDT1-202ENST00000562747 ARL6IP5O75915 188 aa13.48□□□□□ -0.25
CDT1-202ENST00000562747 OR7C1O76099 320 aaPredicted RBP13.48□□□□□ -0.25
CDT1-202ENST00000562747 PAHP00439 452 aa13.48□□□□□ -0.25
CDT1-202ENST00000562747 ATXN7L3Q14CW9 347 aaPredicted RBP13.48□□□□□ -0.25
CDT1-202ENST00000562747 ZNF782Q6ZMW2 699 aaPredicted RBP13.48□□□□□ -0.25
CDT1-202ENST00000562747 PNKDQ8N490 385 aa13.48□□□□□ -0.25
CDT1-202ENST00000562747 OR13D1Q8NGV5 346 aa13.48□□□□□ -0.25
CDT1-202ENST00000562747 BARHL1Q9BZE3 327 aa13.48□□□□□ -0.25
CDT1-202ENST00000562747 PPIL3Q9H2H8 161 aaKnown RBP13.48□□□□□ -0.25
CDT1-202ENST00000562747 OR6C3Q9NZP0 311 aa13.48□□□□□ -0.25
CDT1-202ENST00000562747 ZNRD1Q9P1U0 126 aa13.48□□□□□ -0.25
CDT1-202ENST00000562747 A0A1W2PP11 408 aa13.47□□□□□ -0.25
CDT1-202ENST00000562747 HSPB6O14558 160 aa13.47□□□□□ -0.25
CDT1-202ENST00000562747 CLPXO76031 633 aa13.47□□□□□ -0.25
CDT1-202ENST00000562747 UBBP0CG47 229 aa13.47□□□□□ -0.25
CDT1-202ENST00000562747 CD37P11049 281 aa13.47□□□□□ -0.25
CDT1-202ENST00000562747 COX7A1P24310 79 aa13.47□□□□□ -0.25
CDT1-202ENST00000562747 IER3P46695 156 aa13.47□□□□□ -0.25
CDT1-202ENST00000562747 FABP5Q01469 135 aa13.47□□□□□ -0.25
CDT1-202ENST00000562747 C1orf100Q5SVJ3 147 aa13.47□□□□□ -0.25
CDT1-202ENST00000562747 UBE2UQ5VVX9 321 aa13.47□□□□□ -0.25
CDT1-202ENST00000562747 C16orf87Q6PH81 154 aa13.47□□□□□ -0.25
CDT1-202ENST00000562747 SPARTQ8N0X7 666 aa13.47□□□□□ -0.25
CDT1-202ENST00000562747 SUMF2Q8NBJ7 301 aa13.47□□□□□ -0.25
CDT1-202ENST00000562747 FCGR1BQ92637 280 aa13.47□□□□□ -0.25
CDT1-202ENST00000562747 DPCDQ9BVM2 203 aaPredicted RBP13.47□□□□□ -0.25
CDT1-202ENST00000562747 DPAGT1Q9H3H5 408 aa13.47□□□□□ -0.25
CDT1-202ENST00000562747 SESN1Q9Y6P5 492 aa13.47□□□□□ -0.25
CDT1-202ENST00000562747 FAM90A10PA6NDY2 464 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 FAM90A18PA6NE21 464 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 FAM90A16PA6NEW6 464 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 FAM90A20PA6NIJ5 464 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 FAM90A8PA6NJQ4 464 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 FAM90A7PA6NKC0 464 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 FAM90A22PA8MWA6 464 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 FAM90A12PA8MX19 464 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 FAM90A5PA8MXJ8 464 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 FAM90A23PA8MXZ1 464 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 FAM90A15PP0C7V4 464 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 FAM90A13PP0C7W8 464 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 FAM90A14PP0C7W9 464 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 FAM90A24PP0C7X0 464 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 OMGP23515 440 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 LGALS4P56470 323 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 SRSF4Q08170 494 aaKnown RBP13.46□□□□□ -0.25
CDT1-202ENST00000562747 SSX1Q16384 188 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 TAF9Q16594 264 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 RSBN1Q5VWQ0 802 aaPredicted RBP13.46□□□□□ -0.25
CDT1-202ENST00000562747 OR52W1Q6IF63 320 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 HEPN1Q6WQI6 88 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 ZNF565Q8N9K5 539 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 BEND2Q8NDZ0 799 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 OR11H6Q8NGC7 330 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 CST11Q9H112 138 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 SPACA1Q9HBV2 294 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 NDUFB11Q9NX14 153 aa13.46□□□□□ -0.25
CDT1-202ENST00000562747 NOTCH1P46531 2555 aa13.45□□□□□ -0.26
CDT1-202ENST00000562747 ZNF729A6NN14 1252 aaPredicted RBP13.45□□□□□ -0.26
CDT1-202ENST00000562747 POM121CA8CG34 1229 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms