RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 RBM39Q14498 530 aaKnown RBP18.75■□□□□ 0.59
SYNGR3-202ENST00000562045 FAM201AQ5SY85 155 aa18.75■□□□□ 0.59
SYNGR3-202ENST00000562045 BRICD5Q6PL45 260 aa18.75■□□□□ 0.59
SYNGR3-202ENST00000562045 SUMF2Q8NBJ7 301 aa18.75■□□□□ 0.59
SYNGR3-202ENST00000562045 DEDD2Q8WXF8 326 aa18.75■□□□□ 0.59
SYNGR3-202ENST00000562045 CMSS1Q9BQ75 279 aaKnown RBP18.75■□□□□ 0.59
SYNGR3-202ENST00000562045 NARFLQ9H6Q4 476 aa18.75■□□□□ 0.59
SYNGR3-202ENST00000562045 IFT46Q9NQC8 304 aa18.75■□□□□ 0.59
SYNGR3-202ENST00000562045 ZNF107Q9UII5 783 aaPredicted RBP18.75■□□□□ 0.59
SYNGR3-202ENST00000562045 AK3Q9UIJ7 227 aa18.75■□□□□ 0.59
SYNGR3-202ENST00000562045 TRAV24A0A0B4J272 114 aa18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 UBE2QL1A1L167 161 aa18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 PLA2G10O15496 165 aa18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 ZNF205O95201 554 aa18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 CD99P14209 185 aa18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 RCVRNP35243 200 aa18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 GPR6P46095 362 aaPredicted RBP18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 TMEM33P57088 247 aa18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 NEK7Q8TDX7 302 aa18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 OCSTAMPQ9BR26 566 aa18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 DPCDQ9BVM2 203 aaPredicted RBP18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 SEBOXQ9HB31 216 aaPredicted RBP18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 WIPI2Q9Y4P8 454 aa18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 RFPL4AA6NLU0 287 aa18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 RFPL4AL1F8VTS6 287 aa18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 IL2RGP31785 369 aa18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 DCDC5Q6ZRR9 648 aa18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 CYYR1Q96J86 154 aa18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 C7orf50Q9BRJ6 194 aaKnown RBP18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 C11orf54Q9H0W9 315 aaPredicted RBP18.74■□□□□ 0.59
SYNGR3-202ENST00000562045 OR2AT4A6NND4 320 aa18.73■□□□□ 0.59
SYNGR3-202ENST00000562045 CENPXA8MT69 81 aa18.73■□□□□ 0.59
SYNGR3-202ENST00000562045 TMEM178BH3BS89 294 aa18.73■□□□□ 0.59
SYNGR3-202ENST00000562045 SIRPB1O00241 398 aa18.73■□□□□ 0.59
SYNGR3-202ENST00000562045 SLC33A1O00400 549 aaPredicted RBP18.73■□□□□ 0.59
SYNGR3-202ENST00000562045 HSPB6O14558 160 aa18.73■□□□□ 0.59
SYNGR3-202ENST00000562045 LYRM1O43325 122 aa18.73■□□□□ 0.59
SYNGR3-202ENST00000562045 PTTG1O95997 202 aa18.73■□□□□ 0.59
SYNGR3-202ENST00000562045 LMO1P25800 156 aa18.73■□□□□ 0.59
SYNGR3-202ENST00000562045 MICBQ29980 383 aa18.73■□□□□ 0.59
SYNGR3-202ENST00000562045 C18orf12Q96KH6 178 aa18.73■□□□□ 0.59
SYNGR3-202ENST00000562045 C12orf4Q9NQ89 552 aa18.73■□□□□ 0.59
SYNGR3-202ENST00000562045 PSG2P11465 335 aa18.72■□□□□ 0.59
SYNGR3-202ENST00000562045 CD80P33681 288 aa18.72■□□□□ 0.59
SYNGR3-202ENST00000562045 TAS2R19P59542 299 aa18.72■□□□□ 0.59
SYNGR3-202ENST00000562045 C11orf91Q3C1V1 193 aa18.72■□□□□ 0.59
SYNGR3-202ENST00000562045 PAN3Q58A45 887 aaKnown RBP18.72■□□□□ 0.59
SYNGR3-202ENST00000562045 MZT2BQ6NZ67 158 aa18.72■□□□□ 0.59
SYNGR3-202ENST00000562045 GVQW1Q8N7I0 195 aa18.72■□□□□ 0.59
SYNGR3-202ENST00000562045 TEP1Q99973 2627 aaKnown RBP18.72■□□□□ 0.59
SYNGR3-202ENST00000562045 ANAPC10Q9UM13 185 aa18.72■□□□□ 0.59
SYNGR3-202ENST00000562045 SVEP1Q4LDE5 3571 aa18.72■□□□□ 0.59
SYNGR3-202ENST00000562045 MUC1P15941 1255 aaPredicted RBP18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 USF1P22415 310 aaPredicted RBP18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 DTYMKP23919 212 aa18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 CEBPDP49716 269 aaPredicted RBP18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 TEX36Q5VZQ5 186 aa18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 SFRP4Q6FHJ7 346 aaPredicted RBP18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 BPIFB2Q8N4F0 458 aa18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 TMEM229BQ8NBD8 167 aa18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 HDHD3Q9BSH5 251 aaPredicted RBP18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 CHST6Q9GZX3 395 aa18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 OOEPA6NGQ2 149 aa18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 FCER2P06734 321 aa18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 PRDX2P32119 198 aa18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 FAUP35544 74 aaKnown RBP18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 MDH2P40926 338 aaKnown RBP18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 LOXL1Q08397 574 aaPredicted RBP18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 ZMYND11Q15326 602 aa18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 TRIM16LQ309B1 348 aa18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 MINDY2Q8NBR6 621 aa18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 OR5T2Q8NGG2 359 aa18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 CHPT1Q8WUD6 406 aa18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 DYRK2Q92630 601 aa18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 ETAA1Q9NY74 926 aa18.71■□□□□ 0.59
SYNGR3-202ENST00000562045 IGKV1D-17A0A075B6S4 117 aa18.7■□□□□ 0.58
SYNGR3-202ENST00000562045 IGHV3OR15-7A0A075B7D8 119 aa18.7■□□□□ 0.58
SYNGR3-202ENST00000562045 ZNF736B4DX44 427 aaPredicted RBP18.7■□□□□ 0.58
SYNGR3-202ENST00000562045 IGHV2-70P01814 119 aa18.7■□□□□ 0.58
SYNGR3-202ENST00000562045 OXA1LQ15070 435 aa18.7■□□□□ 0.58
SYNGR3-202ENST00000562045 HOGA1Q86XE5 327 aa18.7■□□□□ 0.58
SYNGR3-202ENST00000562045 CLDND2Q8NHS1 167 aa18.7■□□□□ 0.58
SYNGR3-202ENST00000562045 RIMS4Q9H426 269 aaPredicted RBP18.7■□□□□ 0.58
SYNGR3-202ENST00000562045 NAP1L6A6NFF2 107 aa18.69■□□□□ 0.58
SYNGR3-202ENST00000562045 CD3DP04234 171 aa18.69■□□□□ 0.58
SYNGR3-202ENST00000562045 FCGR3AP08637 254 aa18.69■□□□□ 0.58
SYNGR3-202ENST00000562045 AKAIN1P0CW23 69 aa18.69■□□□□ 0.58
SYNGR3-202ENST00000562045 NAT1P18440 290 aa18.69■□□□□ 0.58
SYNGR3-202ENST00000562045 COL10A1Q03692 680 aa18.69■□□□□ 0.58
SYNGR3-202ENST00000562045 KRTAP1-1Q07627 177 aa18.69■□□□□ 0.58
SYNGR3-202ENST00000562045 STEAP1BQ6NZ63 245 aa18.69■□□□□ 0.58
SYNGR3-202ENST00000562045 CD177Q8N6Q3 437 aa18.69■□□□□ 0.58
SYNGR3-202ENST00000562045 ANGPTL6Q8NI99 470 aa18.69■□□□□ 0.58
SYNGR3-202ENST00000562045 ST6GALNAC5Q9BVH7 336 aa18.69■□□□□ 0.58
SYNGR3-202ENST00000562045 GSX1Q9H4S2 264 aaPredicted RBP18.69■□□□□ 0.58
SYNGR3-202ENST00000562045 CHMP1AQ9HD42 196 aaPredicted RBP18.69■□□□□ 0.58
SYNGR3-202ENST00000562045 HRASLSQ9HDD0 168 aa18.69■□□□□ 0.58
SYNGR3-202ENST00000562045 PPIAL4EA0A075B759 164 aa18.69■□□□□ 0.58
SYNGR3-202ENST00000562045 TRAV38-1A0A0B4J264 116 aa18.69■□□□□ 0.58
SYNGR3-202ENST00000562045 PPIAL4DF5H284 164 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms